| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1812 |
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| Symbol | |
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| ID | 3520427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1862618 |
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| End bp | 1863856 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284274 |
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| Product | putative permease |
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| Protein accession | YP_268542 |
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| Protein GI | 71279964 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.971161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTAC TTTCTGTTGC CTGGCACAGC TTATTAAGCC GAAAAAAAAC GGCCATCTTG
ACCTTCATAT CATTAACCAT CAGCATTGTA GTATTGCTAA GTATCGAACA TATTCGCCTG
CAAGCAAAAG AAAGTTTTAA TCGTACTATA TCAGGCGTAG ATTTGATTGT CGGCGCGCCT
AGCGGTCAAT TAAACTTATT GTTATATTCT ATTTTTAGAA TGGGCAGCCC TGCCAATAAC
ATTAAGTACA CGAGCTTTAC CATGCTCGAA AAGCGACAAC TAGTTGACTG GGCTATCCCT
ATTTCTCTTG GCGATTCTCA TCGTGGTTTT CGTGTTATTG GCACGAATAA CAGCTATTTT
ACTCACTATC GCTATGGTAA AAAACAGTCC TTAAAATTTG AACATGGCGG TAAATTCTCA
TCCTTATTTG ACGTAGTTAT CGGTGCCGAT GTTGCAAAAG AACTTAATTA TAATTTGGGC
GATGAAATAA TTATTGCTCA TGGTATTGGC AATACAAGCT TTACCAAACA CGAGCAAACA
GCTTTTGTAG TAAGTGGTAT TTTAGCAAGC ACTGGCACGC CCGTTGATAA AAGTGTTCAC
GTAAGTTTAG GTGCCATTGA AGCGATCCAC TTACCGCCAT CAGCATTAAA AAAATGGCTA
ATAAATCCAG AAAAAACACC ACCCGTACCT AAAAGTATTA CGGCTGTTAT GCTTAAGCTA
AAAAGTAAAT TATCAACATT TGGATTACAG CGAGAGATTA ATAACTATCC AACAGATAGA
TTAATGGCAG TTTTGCCTGG TGTTGCCATG ACAGAGCTGT GGAGTTTGAT GGCAACCGTT
GAAAATTTGC TGCGCGCCAT AGCGGTGCTA GTGCTTATTT CATCCTTGTT TGGACTCACA
ACTATGTTGT TGGCCTCAAT GAACGAGCGT CAAACAGAAA TAGCAGTATT ACGCATGTTA
GGGGCTAGTC CTGTTACCCT ATTACTGCTA ATTTTGTTAG AAGCCGTTAT TTTAGTAAGC
CTAGCAATCA TCATGTCAAT AGTAGTACTA ACACTCGCAC TTTATAGTCT TGAGGCATGG
TTGGCTGCTG AATTTGGTTT GTTTTTAAGT GATGATATTT TTACCATGGA ATTGATGTGG
TTAATCTCCA TGATATTTAT CGCAACATTG ATTGTGCCTT TGTTGCCAGG AATAGCAGCA
TATAAGCATG CTTTACACGC TCAACTTTCA AGTCATTAA
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| Protein sequence | MILLSVAWHS LLSRKKTAIL TFISLTISIV VLLSIEHIRL QAKESFNRTI SGVDLIVGAP
SGQLNLLLYS IFRMGSPANN IKYTSFTMLE KRQLVDWAIP ISLGDSHRGF RVIGTNNSYF
THYRYGKKQS LKFEHGGKFS SLFDVVIGAD VAKELNYNLG DEIIIAHGIG NTSFTKHEQT
AFVVSGILAS TGTPVDKSVH VSLGAIEAIH LPPSALKKWL INPEKTPPVP KSITAVMLKL
KSKLSTFGLQ REINNYPTDR LMAVLPGVAM TELWSLMATV ENLLRAIAVL VLISSLFGLT
TMLLASMNER QTEIAVLRML GASPVTLLLL ILLEAVILVS LAIIMSIVVL TLALYSLEAW
LAAEFGLFLS DDIFTMELMW LISMIFIATL IVPLLPGIAA YKHALHAQLS SH
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