Gene CPS_1809 details

Gene Information

• Locus tag: CPS_1809
• ID: 3522414
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1859164
• End bp: 1861134
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637284272
• Product: putative protease
• Protein accession: YP_268540
• Protein GI: 71281942

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.328878
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAAAC ACTTTGTGCG CTCAGCACTA TTCATCATTG TTGTAACTAT CCCAGCTATA 
GCCTCTGCTG CTGAAGACCT AGATTTAAAT AAGGAGCATG TGTATTTTCA AAGTGGATTC 
CATGAAAAGC CTTATTTATT AGAACAAATG CTTTATTCTG ATGGCAACCG TTGGAATTTT 
AATCAAGAAT TAGGAACGCC CGTTACCATA ACTTATGGTT TTACAGGCGA CGAAATGGGC 
TATGTTTTTC CAGATGACAT TCAGCGTGAT TTTTATCAGT ATGAAAAAGA TGTCATTGTT 
GATGTTCTTA CACACATCAG CGAAGTTTCT GGAATTACTT TTGAAGAAAA ATTTACTCGA 
GAAAATTCGG ATTTTGTTTT TCGAATTGGA GCTTACACTG GGTCTGGTAG TAATGTTCCG 
CCAATAGATG AAGCTGATTA CATACGTTAT AGTTATAGGC GAACCGTAAC GTTTAGCCAG 
TCTCATGCAT TACACTATTT AAATCCTAAT CATGATTTTT ATTTAAGAGT TAAAAATGAC 
GATATTGACT ATAAGCATGA TTTTGCTCGA TCTAAAGCGG TTATACTCCG CGATATAAGC 
AGAATTATCG GTTTAACGAG ATGGAATGAT GGTCAAGAGA ATAATAATGA CTTTTATTCA 
GTGATGGCAC CAAAAGCAAC AGGTTTATCT TCTGAAACTT TTGCACCAAC AACTTTAAAA 
AAGTATGACA TTGTTATGCT ACAGCACCTT TATGGTAAAC CTTTCAAAGT AGAAACTGAT 
CCGAATATGA CATACAACTA TGATGATAGT TATGATTTTC ATCAAATGAT TGTTGATAAG 
GATGGTGAAG ATACCATCAG TGTGGTGAAC TCTCAACGTA GTAATATTAT AGATCTACAC 
CCTGGCGCTT TTAGTTCCAT AGCGTCTAGG CCAACTGGTT TCTTTGACCC TGATACTGAA 
AGTGAACACT TAAACCGCAG TTACAATAAC CTATCCATAG ATTATGGTAC TCGTATTGAA 
AACGCAGAAG GCGGTAGCAA TAATGATGTA CTCATTGGTA ATTATACGGC AAACAAGTTA 
AATGGAAATG CAGGGGATGA TAAAATTCAA GGTTATGGTG GTAACGACTT GATAGATGGT 
GGAGCAGGCA TTGACACTGC TGTCTACGCA AATGAGAAAG TGCAATATGA AATCGAATAT 
GTTGGAAATA GTGTAACTGT TTTAACTTTA CCAAGTGGCA ACGAAGGTTT AGACACCTTA 
ACTAATATTG AATTCATTCA ATTTTCAGAT GAAACCATAG CCATTAATCA AGCTCCTGTG 
ATTACTTTAG GAGAAATTAT TACCGTAAAA GAAACAGACC ATGTGACTAT TATAGCTGGA 
GTTTTAGACC ATGAAGGTGA TGAACTTACT TATACTTGGA CTCAACTTAA TGGTACAGAT 
GTTGAGCTAA CAAACACCGA TACAGCAACT ATTATATTTA CTACTCCAAA TGTAGATAGA 
GAAGAAACAA TCACTTTACA GTTAGAAGTT TCAGATGGTT TAAATACAGT AACCAGTTCT 
ATCGCAGTAG TAGTTACTCC TAATACCGCA CCAGTTATTA CGGATATTAC GGTAGACCAA 
GCAGTCGATG AGCGCACTAC TGTGACACTA GCTATTAACG CTACAGATGC CGATAACGAT 
ACGCTTATTT ATCGTTGGGT TGTGAATGGT GCAACAGTAA CACTAATAGG TTCAACTACT 
AATACTGTTA CATTTACAGC TCCAAGCGTT ACAAGCACAA CAACACTAAC CGTTGAAGTA 
TTTGTTACAG ACGGGATTGA TGAAGTTAGT AGTGATACAC GAACTGTAAC GGTTAATAAT 
GTTGATACAG CACCTGAGCC AGAAGTTTCG CCCACTATAG AAAAAAGTAG TGGTGGCTCT 
TTTGGGTACT TTATTTTGCT AATTGCAGGT TTAAGATTAT TTAGAAAGTA A 

 

Protein sequence

MLKHFVRSAL FIIVVTIPAI ASAAEDLDLN KEHVYFQSGF HEKPYLLEQM LYSDGNRWNF 
NQELGTPVTI TYGFTGDEMG YVFPDDIQRD FYQYEKDVIV DVLTHISEVS GITFEEKFTR 
ENSDFVFRIG AYTGSGSNVP PIDEADYIRY SYRRTVTFSQ SHALHYLNPN HDFYLRVKND 
DIDYKHDFAR SKAVILRDIS RIIGLTRWND GQENNNDFYS VMAPKATGLS SETFAPTTLK 
KYDIVMLQHL YGKPFKVETD PNMTYNYDDS YDFHQMIVDK DGEDTISVVN SQRSNIIDLH 
PGAFSSIASR PTGFFDPDTE SEHLNRSYNN LSIDYGTRIE NAEGGSNNDV LIGNYTANKL 
NGNAGDDKIQ GYGGNDLIDG GAGIDTAVYA NEKVQYEIEY VGNSVTVLTL PSGNEGLDTL 
TNIEFIQFSD ETIAINQAPV ITLGEIITVK ETDHVTIIAG VLDHEGDELT YTWTQLNGTD 
VELTNTDTAT IIFTTPNVDR EETITLQLEV SDGLNTVTSS IAVVVTPNTA PVITDITVDQ 
AVDERTTVTL AINATDADND TLIYRWVVNG ATVTLIGSTT NTVTFTAPSV TSTTTLTVEV 
FVTDGIDEVS SDTRTVTVNN VDTAPEPEVS PTIEKSSGGS FGYFILLIAG LRLFRK