| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1798 |
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| Symbol | |
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| ID | 3520574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1844352 |
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| End bp | 1848206 |
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| Gene Length | 3855 bp |
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| Protein Length | 1284 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284261 |
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| Product | ATP-dependent M41 family peptidase |
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| Protein accession | YP_268529 |
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| Protein GI | 71280111 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTAA AAAAATTACT TAACACTTTT TTTGAATATC GCGAAGTACA ATGCTCGGAA
ATGCTAATGG ATAATTCTAT GTTAGAGCAA TCTGATGTAG TTCTGCCGTT GGTTTTACTT
TATATCAAGT TGGCTATCAA AAACACCAAG CTTGAAGGTA AAGTATTGAA ATGTCAGTTA
GTTAAGCAAA CAGAATCATT GTGTTATTTG GCCGCAGAAA ATATTGAATT TATCGATGAA
TATATTGCGC TAAATATTAT TGAAGAATTG GGAGGTTATA ATGCAATTGA GCAGATTGAA
GATAACCGTC CCTGTTTTGT AGAGATAGAG TCTTTAGTAA CAATGTTTCG TAAGTATTTG
CAAAATATAC CAGAAAGACA AAGTTTAGAC GATAATGCAG AGTTTTATCA GCATTATTTG
CAAGTTTTCA AGCTGGAGTT AGATGAAGAC TTTATTGAAA CACAAATAGA AGTAGCAGAA
AGTTATTGGT ATAAGGATAA TCTATCAGTA AATGGCGACA TAGAAGGTGG TGAAGCGCTT
AAACGACAAC CGTTTAAGCT GAAAGAGCAG TATGTAAGGC TAAAATCATC TACGCAGAAT
TTTTTTGAAG AACTGTCAGT TTTAGCTTGT TCAACCTACC TATCCGTACA TCCATCAGTT
GAAGTACAAA ATATTAAGGT AACAGATCTA CCTGAAATTG ACTGTGAACT GGTGCTTTCT
GCACTTATTG GTACTCCAAG CTTTTTGGCA GCCTTGGCAA GCCAATTTCA GTGCCAGCCA
AGTCAAGTGT TAATGCCTGA CGATGTTTAC CATGCGCGGA AAAATCTAAA ACATAAGGCT
GTTACCCGAA GTTTTTCGGT AAACAATGAC ACGACTAAAA ACTGGTATCA AATAACAAAA
AGCTTTGCTT CTAAACTTGT ACTCAATGAA AACTTAAAAT CTTGCTGTGA TTTTTCTTTT
ATTGATAACG AGTTTAATGA CTCATTATTT ATTGAAGCAT TATTAAAATG TAAACATCAC
ATTATTGCGG AACTTGCGGT GTTAAATCAA TGCAGCAATC GTATTAGTAA AGCAATCAAA
GTTGAACAAC AACTCAAACT TGACTTAAAC AAACAAGTTA TAGGCCAGCG AGAGGCTATT
GAAAGTTTAA CGAAAGGATA CCTCACCTCC AACATTGCTT TAAGTGAAGG ACCAAGGCTG
ATATTTACCT TCGCAGGGCC ATCAGGTGTA GGTAAAACCT ATCTCTCTTC TATTTTTTGT
GATTTGCTAA ATCAATATGA ACAATCTGGA TATGCTTTTA CTACCTTCAA TATGGAGCAG
TATGCAGACA AGCAAGATGG GATGAAATTG TTTGGTAGCG GTTTACAATA CAATGAGGCT
AACCTTGGCG TTTTAACAAG TGCCGTAAGA GCACAACCAA GGCAGGTTTT ACTTTTTGAT
GAAATAGAAA AAGCCCATTC AAATGTTACT CAATCACTAC TTAGTATTTT GGATAAAGGC
ATAGCCCAAG ATCAAACCAG TCAAGAATTT ATCAGCTTTG ACCAGTGTAT TGTTATTTTT
ACAACAAACC TCGGTCAGGA AGTACTAGCA AATAATCATC AAAAACATCA ACTGAATATT
TTTGATGTAT TACGGCATGC AGAAAATCCG GCAACTAAAA CCAAGCTCTC GGTTGAATTA
ATTAATAGGC TAGCTAAAGG CTATTCAGTA GCATTTTCTC CTTTACAGAT TAATCATTTT
GTTTATTTAG CAGAAAAAGA ACTCAACAAA ATCAATGACT ACCAAGAGAT GCTTGATTTT
AAATGGCCAG AAAACTTTGC CTCATTTTTG TTGCAATCTT TGGCTCCTGA AATAACGGCA
AGAAAATTAA CAAGTTGCTT GGCCAAGCTC AAGGCTGACA TTTTAGTTAA AGCAAGTAGC
CTAATTACTG AAGATATGTC GCCAATTTCT TGTGCTGTCA GTGTAACTGA AAATATGCCA
AATATTGATG TAAAAAAATT AGTGTTATTC GACAATGACA CTAGACTTCA AGCCCAACTA
GCACAGTCTG AATTTTCACT CTCAGCTAGC ATTGTTGATA GTTTTGAAGA TATAAGAGCC
ATGCTGGAGC AACATCGACC TGATGCCTTT TTAGTTGATA TAGAATCGAT TGCCAATGGT
CAATTGTCTT TAAATGAAAT CACAGAGCAC GTTCATTGCA TTAACAGTCG CATACCAATA
TTCAGCTACC GCGTGGTAGA TATACAAATA GACAACCTGA AAGAACAAAC ACTAAATCAT
AATGTAAGAG AGCATTTTGA ATTGGATTTA GCCACATTTT CTCTGTCGTT TCCAGCCATG
CTTAAACGAA TTAACTATTT CCTTACTATG GAAAAAACTC TATTACGTAT GACAACGCGT
AATGAGACGC TAGAGTATCA ATGTCGAGTA GAGCACAATA ACAAGGTACT CGATGTTTCA
TTTACCAACC TATCTTATCG TCAGGTTATA CAATCCAAAG ACTTGCAAGA AACCAGTTTA
TTTAATCATA GCCTGCCTGA TAATTCACTT GATGATGTTA TCGGCTTAGA AAGAGCTAAA
CGTCGCCTTA TTGAGGTAGT TAGCTGGTTA AAGGCTCCGG AAAAACTGCT AAATTTTGGT
ATAAAAATAC CGACAGGTTT TTTATTTTCT GGCCCTCCCG GAACGGGAAA AACCCTGTTA
GCAAAAGCTG TTGCAGGGGA GTGTGAGTTG CCTTTTTTTA GTGTTGCGGC TTCGGAGCTG
TCAACGCCTC ATAGCGGCGG TACAACGGAA AACATCAAAC AATTATTTGC CACAGCGCGA
AAATATGCAC CCTCAATTAT TTTTATTGAT GAAATAGATG CTATCGCCGC ACAAAGAACC
GATAATTCTG ATGGCAGTTC AAGAGACAAA AATCTAACGG TTAATGCGTT ACTTACTGAA
ATGGATGGTT TTTCAATCGC TGAAGTTCCT GTATTTGTTA TGGCAGCTAC TAATCATCCG
CAGTTGCTTG ATAGCGCTAT TACTCGTCCG GGTCGATTTG ATGAAACAAT TTATTGTGAC
TTACCCAATA AAAATGCCCG ACTGATCTTT TTTAAGCGTT TTGCCAGCAA ACATAAACTG
AATTGGCAAG AAACAGAGCT ACAACAATTA GTTTCGTCTG CACAAGGCAT GTCATCAGCT
GAAATAGATC AAGTGCTGCG TGAGTCGATT TATCAAGCCG TAGGCGAGAA CCAACAATTA
ACCACTGAGC ATATTAAACA AACCATGATC CGCATTGTTT ACGGCGCTCC TTCTGACCAT
ATTTTCTTAG GGGCAGAAGA AAAACGTCGT ACTGCCTATC ATGAAGCAGC ACATTTATTA
GCGTACAAAT TACTCTTTCC TAAGCAGCCG ATAGATTTTA TTACCATCGA ACCAAGAAAC
CAGGCGCTAG GTTTTGTTGC CACCCGTGCC TCAGAAGAAT ATGAAAGTTA TTCAAAACGT
AGGGTGATGC ATAAACTGCA AGTATTGTTA GCGGGTAGGG TGGCTGAAAA ACTTTGTACA
GGAGACTGTG AAGAAGTCAG TACCGGGGCT TCAAACGATA TAGAAAAAGC GACTCAGCTT
GCCATGCATG CTATTTATGA AGGGGGCATT GAACCAACCG TTGGGCCAGT TAATATTGCC
ATGCTCACTA AGTTTGAAGA AAGTGACTTA TTAGCTAATG CTCAACAGGC CGTTAAACAA
TGGCTAGACC AATCTGAGCA GCAGGTAGAG CAATTGCTAA AAGATCATTA TCAACAGCTA
ACATTGGTGG CTGAAACCTT ACTTGATAAA GAGTCATTAT TAGGTGAGGA GATTAACCTC
ATATTTGATA GATAA
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| Protein sequence | MNLKKLLNTF FEYREVQCSE MLMDNSMLEQ SDVVLPLVLL YIKLAIKNTK LEGKVLKCQL
VKQTESLCYL AAENIEFIDE YIALNIIEEL GGYNAIEQIE DNRPCFVEIE SLVTMFRKYL
QNIPERQSLD DNAEFYQHYL QVFKLELDED FIETQIEVAE SYWYKDNLSV NGDIEGGEAL
KRQPFKLKEQ YVRLKSSTQN FFEELSVLAC STYLSVHPSV EVQNIKVTDL PEIDCELVLS
ALIGTPSFLA ALASQFQCQP SQVLMPDDVY HARKNLKHKA VTRSFSVNND TTKNWYQITK
SFASKLVLNE NLKSCCDFSF IDNEFNDSLF IEALLKCKHH IIAELAVLNQ CSNRISKAIK
VEQQLKLDLN KQVIGQREAI ESLTKGYLTS NIALSEGPRL IFTFAGPSGV GKTYLSSIFC
DLLNQYEQSG YAFTTFNMEQ YADKQDGMKL FGSGLQYNEA NLGVLTSAVR AQPRQVLLFD
EIEKAHSNVT QSLLSILDKG IAQDQTSQEF ISFDQCIVIF TTNLGQEVLA NNHQKHQLNI
FDVLRHAENP ATKTKLSVEL INRLAKGYSV AFSPLQINHF VYLAEKELNK INDYQEMLDF
KWPENFASFL LQSLAPEITA RKLTSCLAKL KADILVKASS LITEDMSPIS CAVSVTENMP
NIDVKKLVLF DNDTRLQAQL AQSEFSLSAS IVDSFEDIRA MLEQHRPDAF LVDIESIANG
QLSLNEITEH VHCINSRIPI FSYRVVDIQI DNLKEQTLNH NVREHFELDL ATFSLSFPAM
LKRINYFLTM EKTLLRMTTR NETLEYQCRV EHNNKVLDVS FTNLSYRQVI QSKDLQETSL
FNHSLPDNSL DDVIGLERAK RRLIEVVSWL KAPEKLLNFG IKIPTGFLFS GPPGTGKTLL
AKAVAGECEL PFFSVAASEL STPHSGGTTE NIKQLFATAR KYAPSIIFID EIDAIAAQRT
DNSDGSSRDK NLTVNALLTE MDGFSIAEVP VFVMAATNHP QLLDSAITRP GRFDETIYCD
LPNKNARLIF FKRFASKHKL NWQETELQQL VSSAQGMSSA EIDQVLRESI YQAVGENQQL
TTEHIKQTMI RIVYGAPSDH IFLGAEEKRR TAYHEAAHLL AYKLLFPKQP IDFITIEPRN
QALGFVATRA SEEYESYSKR RVMHKLQVLL AGRVAEKLCT GDCEEVSTGA SNDIEKATQL
AMHAIYEGGI EPTVGPVNIA MLTKFEESDL LANAQQAVKQ WLDQSEQQVE QLLKDHYQQL
TLVAETLLDK ESLLGEEINL IFDR
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