| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1795 |
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| Symbol | |
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| ID | 3521104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1836529 |
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| End bp | 1840434 |
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| Gene Length | 3906 bp |
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| Protein Length | 1301 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637284258 |
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| Product | ATP-dependent M41 family peptidase |
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| Protein accession | YP_268526 |
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| Protein GI | 71280636 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases
[COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGTG AAATGTTAGT TAGAACATTT TTTGATAATA ATTCTCTTAA ATGTTCAACC
TCCGCTTTAG ATTACGGTAT TGCCAGCCAA AAAGACGTGT TTTTGCCTGT GGTTTTGGCT
TATATAAAGT TTGCATTAAA AGACACCTCG TTTGAAAATT CTTGCTTAGT CTGTACGTTA
TCAAAAACAA CAGAATCATT GACCTACTTA AAAGTAGATA AATTCGACTT GTTAGATGAA
AGACTTGCTC ATCATGTACT TAAGGTATTG GGTGGCTATC AATCTTTACA ATGGTTTGAA
AGTCAATTGG ATGGAGATAT TGATATTACA CTTGTTGTTG AATATTTTCG AGAACACTTA
AAAATAGTAC CTGAAGGTGA AGAGTTAAAT GACGGGGCTT ATTTAGATGA ATTGTTTTCT
GTGGTTTTAT CAAAAAACAT TGATAAAAAT CGCTTAGTTA AAGATCTAGA ACAATTTATT
GCTAATCGAG ATGCTGAACT AAAGGAATCT GAACACAATA TTGATGCACC ATCCCCGGTA
ACAGAAAACA CGATAAACGA GCAGCAGACA GCGTTTATAC TTGAAAAAGA TTATATCTCT
TTAGATCGTA AGCTTAAAAA TTTCTTCAAT GAAATGACAT TCATTGCTTG CGCGAAATAC
TTGTCTTCAT CACCAGAAGC TAAAATACAA GAAATTAATA CCAATAATTT ACCTACAATA
GACACTGAAA TATTGTTATC AGCCATCATA GGCACGCCAG AATTACTTAA GGTACTTGCT
GACGAGTTTG ATTGTCAGCC TTCTCAAATT GTTATGCCAT CTGTCATTTA TAAAAACCGT
GAATTACTTA AAGATTCAGT AGGCACGCGT ACCCTGCAAG ATAGTGCAAA TAATACAAAA
AGTTGGTATC AGCTTGCAGA AAAGTACACA ACTAAACTTG ATATAAAAAC CGATATTAAA
AACTGTTTAA GCATAGCTTT TAATGAAAAA AAATTGAACC TACTCACATT TGTTAAAGCT
TTATTAGATC TAAAAAGTGA GAGTATAGAG AGCTTATCAC GCTCAAATAA GTTAGTTAAT
CACACAATAA AATCAATGTT TGTTCAACAA AATTTAACCG AGTATCTAAA CAGTAAAATT
ACCGGTCAAC AACAAGCGAT AGAACATTTA GCTAACGGCT ATTTAACCTC ATGTATAAGC
AAGGTAAATG GCCCACGCTT AATTTATACA TTTGCAGGGC CATCAGGTGT AGGTAAAACC
TTTTTAGCTA ATGTTTTCAG TGATTACTTA AATGAATGTG AGCATTCTGG CTATGCTATT
AGTACATTCA ATATGGAACA GTTTAATAAT GAAAAAAATA GCGCAAGATT ATTTGGCTCT
GGCTCTGAAT ACATAGATTC AGGCGTTGGT GTATTAACCG GCACGGTAAA AGCACAACCA
AGGCATATCT TATTATTCGA TGAAATAGAA AAAGCGCATT CAAATGTTAT TCAATCGCTT
CTTACACTAT TAGATAGTGG CGTTGCTATT GACCAAACGC TTACTTTACC CGTTGATTTT
ACCCAATGTA TTGTTATTTT TACCACTAAC CTTGGCCAAG ATGTCTTAGC TAAAAATGCA
CAAAATCATC AGGTAAATAT ATTTGATGTA CTAAGAAATG CTGAAAACCC AGCGACCAAA
ACTAAATTAT CAATTGAATT CATTAACCGT TTATCAAAAG GTTATTCAAT TCCATTTTCC
ACTTTAAAAA CAAACCATTT GATTTCGCTT GCTGAAAAAG CGTTGAATAA TAAAAGTGAG
AATATCGCAG GTGTACAATT TAGTTGGCCG ACAAGTTTTT CTTCATTTTT GTTAAAGCGT
TTATCCCCAG AAGTTACCGT AAGGCAATTA ACAACGTGTG TAGCTAAACT TAAATCAGAA
ATTTTGACCA AGTCAGCTCC AAATGTAGGT GAGCATACAA CAGCACTAAA ATATATTATC
AATGTTGAAG ACAATGAAGA GTCGCTAGTA GCCCAAAGTA TATTACTTTT TGATAATGAC
AATCGGCTGC AAAATGAATT GTCAATCTCA CATTCAGACA AGAATATTCA TGTAATGAAT
AATTCTGACG AAATTGCGCA AATGTTAAAG CTTCATCGAC CTGACGCTTT TTTAATTGAT
ACTGAATCAG TTGATCATGC TGTTGAGTCG TTAAATGACA TCATTAATAA AGTTCATGCT
GTTAACTCTA TTATTCCCTT GTTTTCATAC CGAATTATCG GAGAGAGTAA TATTGACTCA
GTACCTCGAG ATCAAAACAT AAGGGAGCAC TTTGAACTAG CACTAAATCA TTTAGATACT
ACTTTTTACG AAATGTTAGA AAGAATTAAC TATTATTTAA CCACTGAAAA ATCATTGTCT
AGCATGTTAA GTAGAAACGA AAAACTAAAC TACCAATGTA AAATAACAAA TCAGCAGTTA
GAAAACGATG AGCAAGAGCA AGTTGGTAAA ATAGAAAACT TTGATGTTTC ATTTCATCAA
TTGTCAGTTA ATCAAGTTAT TGAATCTAAA GATATACAAG AAACTAGCTT CTTTAATCAG
AGTTTACCTA CAGAAAAACT TGATGATGTT ATTGGTTTGC AGCGAGCTAA AAATCGACTG
TTAGATGTAA TTGAATGGAT GAAATTTCCT GATAAGTTAC AAAACTTCGA CGTAAAAATA
CCAACAGGAT TTTTATTTGC AGGTCCGCCG GGTACGGGAA AAACCTTTTT AGCAAAAGCT
GTTGCTGGCG AATGTGGCTT ACCTTTTTTC AGTGTTTCTG CGTCTGAACT TTCATCAACA
ATAATTGGAG GTTCATCTGA AAAAATAATG GCGTTATTTT CAGTTGCTAG AAAATATGCA
CCATCAATAG TTTTTATTGA TGAGATTGAC GCAATAGCTT CACAAAGATC AGAAGACAGT
CAAGGTAACT CACGAGAACG TAATGCAATA GTAAATACAC TGTTAACTGA AATGGATGGT
TTTTCATCTT CTGAATCACC TGTCTTTGTA ATGGCGGCAA CCAATTACCC ACAATTATTA
GACAAAGCCA TTTTGCGACC AGGGCGCTTT GACGAAACGA TTTTTTGTGA TTTACCCAAC
AGTGAAGCGC GCACCATATT TTTTGAAAAA TTCGCCCAAA AACAGAACCT GCAATGGCAA
CAATCAGACT TAACCGCGCT TGTATCATCT TCGCAAGGTA TGTCGTCGGC TGAAATAGAC
CAAGTATTGC GAGAAGCCAT ATATCAAGCC GTAGGTACCG AGAAACCGTT AACCATTGAG
CATATTAAGC AAACCATAGT AAGAGTTGTA TATGGCTCTC CGTCTGAAAA TATTAAATTA
GGTAAAGAAG AAAAACGCCG AACAGCTTTT CACGAAGCCG CGCATTTGCT CACTTATAAA
CTGCTATTTC CGAATCAAAT AATTGATTTT GCAACCATAG AACCAAGAAA CCAATCACTC
GGTTTTGTCG CTACGCGTGC TTCTGAAGAA TACGAAAGCT ATTCGAAAAC CCGAGTAATG
AATAAATTAC AAGTTTTACT TGCTGGCCGT GTGGCAGAAA AGCTTTGCAC TAATAATGCT
GATGAAATTA GCACGGGCGC ATCAAACGAT ATTGAAAAAG CGACACAACT TGCCATGCAT
GCTATTTACG ATGGCGGTAT AGAAGAAAGT GTAGGCCCCG TAAATGTGGG CATATTAACC
AAATTTGAAG AAAGCGAGTT GCTAGCAAAG GCACAAAAAG CTGTTCAGCA ATGGTTAATT
ACAGCAGAGC AAAGTGTAGA AAAATTATTA AATGATAATT GCCACCAACT TGAGTTAGTT
GCTAATACAT TATTAGAGAA AGAATCTCTG TTGAGTGACG AAATTAATAC ACTATTTATT
CAGTAG
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| Protein sequence | MISEMLVRTF FDNNSLKCST SALDYGIASQ KDVFLPVVLA YIKFALKDTS FENSCLVCTL
SKTTESLTYL KVDKFDLLDE RLAHHVLKVL GGYQSLQWFE SQLDGDIDIT LVVEYFREHL
KIVPEGEELN DGAYLDELFS VVLSKNIDKN RLVKDLEQFI ANRDAELKES EHNIDAPSPV
TENTINEQQT AFILEKDYIS LDRKLKNFFN EMTFIACAKY LSSSPEAKIQ EINTNNLPTI
DTEILLSAII GTPELLKVLA DEFDCQPSQI VMPSVIYKNR ELLKDSVGTR TLQDSANNTK
SWYQLAEKYT TKLDIKTDIK NCLSIAFNEK KLNLLTFVKA LLDLKSESIE SLSRSNKLVN
HTIKSMFVQQ NLTEYLNSKI TGQQQAIEHL ANGYLTSCIS KVNGPRLIYT FAGPSGVGKT
FLANVFSDYL NECEHSGYAI STFNMEQFNN EKNSARLFGS GSEYIDSGVG VLTGTVKAQP
RHILLFDEIE KAHSNVIQSL LTLLDSGVAI DQTLTLPVDF TQCIVIFTTN LGQDVLAKNA
QNHQVNIFDV LRNAENPATK TKLSIEFINR LSKGYSIPFS TLKTNHLISL AEKALNNKSE
NIAGVQFSWP TSFSSFLLKR LSPEVTVRQL TTCVAKLKSE ILTKSAPNVG EHTTALKYII
NVEDNEESLV AQSILLFDND NRLQNELSIS HSDKNIHVMN NSDEIAQMLK LHRPDAFLID
TESVDHAVES LNDIINKVHA VNSIIPLFSY RIIGESNIDS VPRDQNIREH FELALNHLDT
TFYEMLERIN YYLTTEKSLS SMLSRNEKLN YQCKITNQQL ENDEQEQVGK IENFDVSFHQ
LSVNQVIESK DIQETSFFNQ SLPTEKLDDV IGLQRAKNRL LDVIEWMKFP DKLQNFDVKI
PTGFLFAGPP GTGKTFLAKA VAGECGLPFF SVSASELSST IIGGSSEKIM ALFSVARKYA
PSIVFIDEID AIASQRSEDS QGNSRERNAI VNTLLTEMDG FSSSESPVFV MAATNYPQLL
DKAILRPGRF DETIFCDLPN SEARTIFFEK FAQKQNLQWQ QSDLTALVSS SQGMSSAEID
QVLREAIYQA VGTEKPLTIE HIKQTIVRVV YGSPSENIKL GKEEKRRTAF HEAAHLLTYK
LLFPNQIIDF ATIEPRNQSL GFVATRASEE YESYSKTRVM NKLQVLLAGR VAEKLCTNNA
DEISTGASND IEKATQLAMH AIYDGGIEES VGPVNVGILT KFEESELLAK AQKAVQQWLI
TAEQSVEKLL NDNCHQLELV ANTLLEKESL LSDEINTLFI Q
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