Gene CPS_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1786 
Symbol 
ID3519382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp1829234 
End bp1829821 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content39% 
IMG OID637284249 
Producthypothetical protein 
Protein accessionYP_268517 
Protein GI71279102 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.440271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA AAATGTTAAA AGCGGCTTTG GCTGGCTTGA TTTTATCTAT TAGTGGTTTT 
GCTAATGCTG GAGTTATTCC ATTAGGTAAC TTAGAAGATG GTACTGTATT TTCTGGTACT 
GTCATCGGTG ACGATGATAG TTTTATAGCT TCACTCGGTG ATTATTGGAC TTTTAATGGA 
GCCGCAGGTG ACATAATTGA TATTGATATT AACAGAACTG AAGCATCACC AGATTTAATT 
GCTACTCTAT TTTTTGGTGA TGTTACAGGG TTGGATGTCG ATTCACTTAG CCCTGACGGT 
TTAATCAATG GGCTCCTTGT ATCAAATGGT GTTTTTGGCC CATTAACAGT AATAGATACT 
CAGGATGATA CGGAAAATGA TTCGTTTGGA GGTCCTTTTG GAGATCCACG GTTTAATTTA 
TCCTTATCTT CTACAGGCAC TTACACCTTA CTTGTAGCTA CTTTGAGTGC CCCTGGTTCG 
TATGAAATAA GCACTACTGG GATTACATCA GTCCCAGAGC CTTCTACCCT TGCGATCTTT 
GCATTAGGCA TTATGGGTTT AGCTGCACGA AGATTTAAGA AACAATAA
 
Protein sequence
MNMKMLKAAL AGLILSISGF ANAGVIPLGN LEDGTVFSGT VIGDDDSFIA SLGDYWTFNG 
AAGDIIDIDI NRTEASPDLI ATLFFGDVTG LDVDSLSPDG LINGLLVSNG VFGPLTVIDT 
QDDTENDSFG GPFGDPRFNL SLSSTGTYTL LVATLSAPGS YEISTTGITS VPEPSTLAIF 
ALGIMGLAAR RFKKQ