Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1784 |
Symbol | pntB |
ID | 3521438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1827186 |
End bp | 1828595 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284247 |
Product | pyridine nucleotide transhydrogenase |
Protein accession | YP_268515 |
Protein GI | 71280969 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCTA CACAAATAGC GTCTAATGGC TTCATTAGTG CAGCATACGT GATTGCTGCT TTATTATTTA TTTTCAGTTT AGCAGGTTTA AGCAAACAAG AATCGGCTCA AAGGGGGAAC TTATTTGGTA TGGCTGGTAT GGCTATCGCT TTACTTGCCA CCATTATTGA TCCAAGGGTT TCTAATGTCT TTATCATTAT TATTGCGATG GTTGTTGGTT CAGGAATTGG ACTGAGATTA GCGAATAAAG TTGAAATGAC ACAAATGCCT GAGCTTGTTG CAATCTTGCA TAGTTTTGTA GGTTTAGCTG CCATGTTAGT TGGTTTTAAT AGCTATTTTG ATTCGGGGCA TAGTGTTGTG CTTACGGCAG CCCAGCACAC CGCTATGAAA ATACACTTAA GTGAAATTTT CATCGGAATA TTTATTGGTG CTGTGACTTT TACTGGCTCT ATTGTCGCTT TTGCGAAACT ACGTGGAACG ATAAGCTCTA GTGCTTTAAT GTTACCTCAT CGTCATAAAA TGAATTTAGC CGCAGGGATT TTCAGCTTTT TATTGCTACT TTCTTTTGTC AATCATGACG GTTCAAATAT AGCCTTATTC TTAATGACTA TTACTGCTTT GGTCTTTGGT TGGCATTTGG TTGCTTCAAT TGGCGGTGCA GATATGCCAG TTGTTGTCTC TATGTTAAAT TCTTATTCAG GTTGGGCAGC AGCTGCTGCT GGTTTTATGT TAAGTAATGA TTTGCTTATC ATTACGGGGG CTTTGGTTGG CTCGTCAGGG GCTATTTTAT CTTACATTAT GTGTAAGGCA ATGAATCGCT CTTTTATCAG TGTCATTGCC GGAGGTTTTG GTACAGACGT TGTTATTGAT AACGATAAAG ACTACGGTGA GCACACAGAA GTGCATGCGG AAGCGGTTGC TGACTTATTA CGTAATGCCA AATCTGTCAT TATCGCCCCA GGTTACGGTA TGGCTGTTTC TCAAGCGCAA TATCCTGTTT ATGAGCTGAC CCAACAACTT ATGAATAAAG GAATAAAGGT TCGTTTCGCT ATACATCCGG TGGCTGGTCG TCTACCCGGA CATATGAATG TATTACTGGC TGAAGCAAAA GTGCCTTATG ATATCGTTTT AGGTATGGAT GAAATCAATG ATGATTTTGT TGAGGCTGAT GTAGTATTGG TTATTGGCGC TAATGATACC GTTAACCCAG CTGCTGCCGA AGACCCAACT AGCCCTATCG CAGGAATGCC GGTGCTTGAA GTTTGGAATG CTAAAGAAGT TATTGTGTTC AAGCGCTCAA TGAGTACGGG TTATGCAGGA GTGCAAAACC CATTGTTCTT TAAGGACAAT ACTCAAATGC TATTTGGTGA TGCTAAAGAT AGTGTGGAGC AAATATTTAG AGCGCTTTAA
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Protein sequence | MESTQIASNG FISAAYVIAA LLFIFSLAGL SKQESAQRGN LFGMAGMAIA LLATIIDPRV SNVFIIIIAM VVGSGIGLRL ANKVEMTQMP ELVAILHSFV GLAAMLVGFN SYFDSGHSVV LTAAQHTAMK IHLSEIFIGI FIGAVTFTGS IVAFAKLRGT ISSSALMLPH RHKMNLAAGI FSFLLLLSFV NHDGSNIALF LMTITALVFG WHLVASIGGA DMPVVVSMLN SYSGWAAAAA GFMLSNDLLI ITGALVGSSG AILSYIMCKA MNRSFISVIA GGFGTDVVID NDKDYGEHTE VHAEAVADLL RNAKSVIIAP GYGMAVSQAQ YPVYELTQQL MNKGIKVRFA IHPVAGRLPG HMNVLLAEAK VPYDIVLGMD EINDDFVEAD VVLVIGANDT VNPAAAEDPT SPIAGMPVLE VWNAKEVIVF KRSMSTGYAG VQNPLFFKDN TQMLFGDAKD SVEQIFRAL
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