| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1780 |
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| Symbol | |
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| ID | 3518624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1822889 |
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| End bp | 1823809 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637284243 |
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| Product | LysR family substrate binding transcriptional regulator |
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| Protein accession | YP_268511 |
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| Protein GI | 71278912 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC TCGGTGATAT TGAATTGTTT GTGCGGGTCA TAAAAAATGA AGGTTTAGCT
GCAGCAGGTA GAGAAGTTGG GCTTTCACCG GCAAGAATGA CTGCGCGTAT AAATGGCTTA
GAAGAAAGGT ACGGCGTTAG ATTGTTAAAC CGAACAACTC GCCGGATTTC ACTAACCGAT
GAAGGACGTA AGTTTTACGT TTCCTGCGAG CGAATTTTAG CGGAAGTAGA GCAGGCCGAA
ACTTCATTAC AAACGGGTCA AACAAGCTTT ACAGGCGCAC TACGCATAAC TGCACCATCT
GATCTTGGAC AACAACACAT AGCACCCGTG TTATCAAGGT TTGTAGAAGA GCATCCTAGC
ATCACACCTT ATCTCTTTCT TTCTGACAGT GTTGTCGACC TAGTAGGGAA CGGTTTTGAT
TTAGGGATCC GCTTCGGCAG TTTGAAAGAC AGCACGCTGA TAGCACGTCG ATTGGCGAGT
AATCGTCGAG TATTGTGTGC TTCACCTGAT TATCTGAAGC GTAAAGGCAT ACCTGTGCTT
CCTGAAGAGT TAATACAGCA TGATTGTTTG ACCATGGTTC GTATGGCTGA ACCACTAACT
ACTTGGCACT TTCAAGGTAC CGCTGGTAAC AGTTCAATTT CAATTCAAGG GACGAGAGCG
TCCAATGACG GTGCTTTGAT TAGGCGCTGG GCCATTGAAG GGGCCGGTAT TGCATTAAAA
TCATATTGGG ATATTGCTGA GGATCTAAAA GCAAAACGCT TAGTGACGGT TATGGATAAT
TACCAATATG ACTTTAATCG AACAGGAACC ACCGGAGGGG CTGATCTCCA TGTTATATAC
CCGAATAGAA AGTTCATTTC ACTAAGAACC ACCGCGTTTA TTGAAGCTTT GAAGCAGCAC
TTTACTTCGG TAGACAGTTA A
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| Protein sequence | MDKLGDIELF VRVIKNEGLA AAGREVGLSP ARMTARINGL EERYGVRLLN RTTRRISLTD
EGRKFYVSCE RILAEVEQAE TSLQTGQTSF TGALRITAPS DLGQQHIAPV LSRFVEEHPS
ITPYLFLSDS VVDLVGNGFD LGIRFGSLKD STLIARRLAS NRRVLCASPD YLKRKGIPVL
PEELIQHDCL TMVRMAEPLT TWHFQGTAGN SSISIQGTRA SNDGALIRRW AIEGAGIALK
SYWDIAEDLK AKRLVTVMDN YQYDFNRTGT TGGADLHVIY PNRKFISLRT TAFIEALKQH
FTSVDS
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