Gene CPS_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1770 
Symbol 
ID3519776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1814985 
End bp1815431 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content40% 
IMG OID637284233 
ProductDoxD-like family protein 
Protein accessionYP_268501 
Protein GI71279321 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCT CTTTTATAAA AACACTTATG ACAACTAATG CGGGTTTTGC TGCGTTAGCC 
CTTAGAATTC CAACCGCTAT TATTTTTATC GCTCATGGCG CACAAAAATT GTTTGGCTCA
TTTGGCGGTT ATGGTTTAGA AGGAACCGGT CAGTGGATGG CATCAATAGG GCTTGAGCCA
GGGTATCAAT TGGCGTTATT AGCCGGTAGT GCAGAGTTTT TCGGCGGTAT TGCTTTATTA
ATCGGTTTAC TGGTTCGCCC AGCAGCGTTA ATGCTTAGCG TTACCATGGT AGTCGCCATT
TTTAGTGTGC ATTTTGCCAA TGGTTTATTT ATGACGAATA ACGGTTATGA ATTTGCGCTT
GCCTTATTAG CGGTATCATT TTCATTAATG TTTAGTGGTG CAGGTAAGCT TTCTCTAGAT
AATTTATTAG CGGAAAAGTT AGCTTAA
 
Protein sequence
MNTSFIKTLM TTNAGFAALA LRIPTAIIFI AHGAQKLFGS FGGYGLEGTG QWMASIGLEP 
GYQLALLAGS AEFFGGIALL IGLLVRPAAL MLSVTMVVAI FSVHFANGLF MTNNGYEFAL
ALLAVSFSLM FSGAGKLSLD NLLAEKLA