Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1749 |
Symbol | cpxA |
ID | 3521269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1794175 |
End bp | 1795593 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637284212 |
Product | sensor protein CpxA |
Protein accession | YP_268480 |
Protein GI | 71280800 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0671148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGT TACCACCGGC ATGGTCTAAA AAATTTTCCT TAGGCATTAG CTTAAAGCTA TTTTTGGCTT TCTGGCTAGT TATACTTACC TCTGTGCTTA TTAGTTACCT CGTTACTATG CAGTTTCGTC ATAGTCCTAT CCAAGAACAA GCTAACCCAC AACAATTAAA ACTATTAAAG CAATACACGC AAAAACTAGC AGATAAGGAT CAGGTAAGAC TTAAAAAGGT ACAAGAGAAC TTCCGCCGTA AATATCACCA GTATTTACTC ATAAAAAAAA TAAGTAACAA CAAAGTTTAT ACACCAAGAA AACGAGGCTG GTCAGAAGTA AGAGATTATT TAACAAAGCA TCCGCTCGAA AATCCCGTCA CTGTTGATTT TGCTTTTACC AAGGTGACGT CTTCTGAGCC CATAATAATT AATGGCGAGC AGTTCCAACT GTTCATTGCC AATGAAGTTC ACCGTAAACG TTTAGTGAGT TTGGTCAATC AACTACCTGT TGCTTTGCGT TTATTGATGT TATTAACGAT TAGTTTCCTA TCATGCTGGT TACTAGCGAA AAGCTTTACT AATCCATTAA TAGCCATACA AAAAGCAAGT GAGAGTATAG GCGAAGGCAA ATTAGCGACT CGTATAACAA AGTTTGACCA GCGCTCTGAC GAGTTTGGTA CCCTTGCACG TAGCTTTAAT AAAATGGCTG AGCAACTAGA AAATAATATT ACTGCGCATC AGCGTTTATT GGGTGATGTG TCTCATGAAC TTAGATCGCC ATTAACTCGT TTACAACTTG CCGTTGCCTT AGCTGAAAAA AATATGGGCA ATGACGTTGA ACAACAAAAA CATTTGAACC GCTGTGAAAC TGAAGTTGAG CGATTAGATG AAATGATAGC CGATGTGCTT ACCCTTTCAA GACTAGAACA TAACCAAAAT GTTTTTGCTG CTGATGATAT TGATCTCAGT ACTTTAGTCG CTCAAGTTGT TAATGATTGT CAATACTTTG CGACCAGCAG AAATGTCACT ATCGTTCTCA AAACTCAAGC TAACTGTGCT CTTTTAGCTG ACAGTAAACT GCTGAGCAGT GCGATCAGTA ATGTGGTAAA TAACGCAGTA AAATATTCGC CAAACGACCA AGTAGTGACA GTTGAATTAC GTCAGATAAA TGAGCAGATA ATGTTAATCG TTTCTGATCA AGGACCTGGT GTACCGAATG AAATGATAGA GAAACTTTTC ACTCCTTTTT TTCGTGTGGC CGATGGTAGA GAAAGAAGTA GCGGAGGCAC AGGTTTAGGC CTAGCAATAG CCCAACAAGC CATACTATTC CACCAGGGTG ACATAGTTGC ACAAAATCAA GAATCAAGCG GTCTTAAAGT CATCATTACC CTACCGACTT TATCGAAGCA GAATAAAAGT AATACCTAA
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Protein sequence | MFKLPPAWSK KFSLGISLKL FLAFWLVILT SVLISYLVTM QFRHSPIQEQ ANPQQLKLLK QYTQKLADKD QVRLKKVQEN FRRKYHQYLL IKKISNNKVY TPRKRGWSEV RDYLTKHPLE NPVTVDFAFT KVTSSEPIII NGEQFQLFIA NEVHRKRLVS LVNQLPVALR LLMLLTISFL SCWLLAKSFT NPLIAIQKAS ESIGEGKLAT RITKFDQRSD EFGTLARSFN KMAEQLENNI TAHQRLLGDV SHELRSPLTR LQLAVALAEK NMGNDVEQQK HLNRCETEVE RLDEMIADVL TLSRLEHNQN VFAADDIDLS TLVAQVVNDC QYFATSRNVT IVLKTQANCA LLADSKLLSS AISNVVNNAV KYSPNDQVVT VELRQINEQI MLIVSDQGPG VPNEMIEKLF TPFFRVADGR ERSSGGTGLG LAIAQQAILF HQGDIVAQNQ ESSGLKVIIT LPTLSKQNKS NT
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