Gene CPS_1747 details

Gene Information

• Locus tag: CPS_1747
• ID: 3522884
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1792260
• End bp: 1792946
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637284210
• Product: hypothetical protein
• Protein accession: YP_268478
• Protein GI: 71282410
• COG category: [R] General function prediction only
• COG ID: [COG0790] FOG: TPR repeat, SEL1 subfamily

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGATGC TAGCTGAGCT TTATTATCAA GGTCATGGTA CTAAAAAAAG CCTCGAGAAA 
TCCATTCAAT ACTTTCGTAA AGCGTCAATA TACCAATCTG CTTATGCACA GTATCGAGTA 
GGAATTTTTT ATTTAATGGA AGAGGACTTT ATTGATACGG ATAAAGGTAT TAAGTATTTA 
AGAAAAGCCG CTAAAAATGG CAATGTTGAA TCAGCCTTTT TATTAGGGGC TATTTTTGGC 
ACAGGCGAAC TGGGCATTAA AGACGTAGGT GAATCGGACA AGTGGCTGGT AAAAGCGCTT 
GAAGATAAAC ACCTGCTCGC ACAAAAATAT GCTGCTTATT TGTATAAAAC GGGTCAGGTT 
GATAAAGAAC ATTATATTAA AGTCAATAAA GTTATTAGTA AATTGTCAGT TCAAACTATT 
AAAGATGAAG AGTTTACAGA AAGGTTATCT AAACCATCGA CCGAAATTCA ATGGTTAAAC 
TTGCCAAATA GCACAGCCAA TAGAATGAAA AATGATTCAC TTGAAAACGT GTTTAATTAC 
GCTTCGTTTG GTATGAAAAA TGTCACCACT GAGGATGACA TTGTCATTGA AGCCAGCAAA 
ATTAAATGTG GAAAGATATT TGCCTGCTAT CAAGTCAATA AAGACAACTT TAGGAACTCT 
GCCACTACTC AGGTGACCGC TTTATAG 

 

Protein sequence

MSMLAELYYQ GHGTKKSLEK SIQYFRKASI YQSAYAQYRV GIFYLMEEDF IDTDKGIKYL 
RKAAKNGNVE SAFLLGAIFG TGELGIKDVG ESDKWLVKAL EDKHLLAQKY AAYLYKTGQV 
DKEHYIKVNK VISKLSVQTI KDEEFTERLS KPSTEIQWLN LPNSTANRMK NDSLENVFNY 
ASFGMKNVTT EDDIVIEASK IKCGKIFACY QVNKDNFRNS ATTQVTAL