| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1744 |
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| Symbol | |
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| ID | 3521230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1788244 |
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| End bp | 1789350 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284207 |
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| Product | metal-binding diguanylate cyclase domain-containing protein |
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| Protein accession | YP_268475 |
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| Protein GI | 71280761 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2703] Hemerythrin
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR02481] hemerythrin-like metal-binding domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TTATTTGGAA TAGTAATTAC GAAACAGGTG TTGCTAAAGT TGATGATCAA
CACCAATGTC TCGTCGAAAT AATTAATGAA TATAGTCACT TATTAGCAAA CAATACAACA
ACCGAAACGG ATATCGAACT AACACTGAAT AAGCTCATTG ATTACACCAA ATTTCATTTT
AAGGATGAGG AACAGTTGAT GTACAGTGTG GGTTTAGATA CTCGTCACAT CACGCATCAC
GAAAAATTAC ACCGTGATAT CCTTGATGAA ATATCTACCT TGTTATCTGA TCAAGTGACG
GATAAGTTAT CTATCGCACG CTACATTTTA GACCTTATTA TACACTGGCT TGTTTATCAC
ATTCTGGGCA CAGATATGAA TATGGCAAAA CAAATGAAAG CAATACAAGG AGGACTCTCA
GCACGCGATG CCTATGACTT TGAAGAGAAA ATTAAAGACA AGTCCACAGA GCCATTACTT
GAAGCACTTA ATGCACTATT TATTCAAATC TCCGAAAGAA ACAAAGATTT AATGGAGCTT
AATAAAACCC TTGAAGCCAA AGTTATTTCA CGCACCCAAC AATTAAGTGA GCGTAATAAA
GAGTTAGCGA TCTTATCATT AACTGACCCA TTAACTAACA TGGCAAACCG TCGTCATGCT
ATGCAACAGT TAACCTTGTT ATGGGAAGAG TCAGTCAATA ATAATTTACC ACTTAGCTGC
TTGATGATAG ATGTTGATTA CTTTAAGCAA ATTAACGACA CACATGGTCA TGATATAGGC
GATGTAGTGT TAATTGAATT AGCCAGAGTT TTTCAACATG CGATAAGAAC GGACGATATT
GCTTGTCGTT TAGGTGGCGA TGAATTTTTT ATAATTTGTC CCGCTACGGA GCTGGAAGGT
GGTTTACTTA TTGCTGAGTT AATAAATGAA CAAGTAGAGT CGCTAAGTAT TGATATATCT
GACAGCCAAC TTTCACTAAG CACCAGTATC GGCGTTGCAA CAAAAACCGC ACAGATGACA
AGTATTGAAG ATCTGATGAA AGCTGCTGAT GACGGGGTTT ATTCTGCTAA ATCAAATGGC
CGTGGTTGTA CTAAAAGTAT TCAATAA
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| Protein sequence | MKTFIWNSNY ETGVAKVDDQ HQCLVEIINE YSHLLANNTT TETDIELTLN KLIDYTKFHF
KDEEQLMYSV GLDTRHITHH EKLHRDILDE ISTLLSDQVT DKLSIARYIL DLIIHWLVYH
ILGTDMNMAK QMKAIQGGLS ARDAYDFEEK IKDKSTEPLL EALNALFIQI SERNKDLMEL
NKTLEAKVIS RTQQLSERNK ELAILSLTDP LTNMANRRHA MQQLTLLWEE SVNNNLPLSC
LMIDVDYFKQ INDTHGHDIG DVVLIELARV FQHAIRTDDI ACRLGGDEFF IICPATELEG
GLLIAELINE QVESLSIDIS DSQLSLSTSI GVATKTAQMT SIEDLMKAAD DGVYSAKSNG
RGCTKSIQ
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