| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1729 |
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| Symbol | tolR |
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| ID | 3519475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1778511 |
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| End bp | 1778936 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637284192 |
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| Product | tolR protein |
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| Protein accession | YP_268467 |
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| Protein GI | 71279039 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACCAAA GAGTTAGACG CCGCAAAGTG GCTGAAATAA ATGTGGTTCC GTATATCGAT
GTAATGTTGG TATTACTCAT TATTTTTATG GTTACCGCAC CTTTAATAAC CCAAGGGGTT
AAGGTTGATC TACCGCAAGC AGATGCAGAG CCGCTTGATG AAGACAGTAA AACACCTCTG
GTTGCCAGCG TAGATGCGCA AGGGCGTTAC TATTTGACCG TTGGAGCCAA TGATAAAGAG
CCAATGTCTG CTGAAGAAGT TGCGATATTA GTTAAAGCAC ACCTAGCTAT TGAACCGGGT
ACTCCGGTAG TTGTTAATGG CGATGGCGCG GTATCATATG ATGCAGTTAT ACAACTGATG
GTGATGTTAC AGAACGTTGC AGGTGTTCCT TCGGTTGGTT TAATGACAGA TTCGGTGGGG
GAATAG
|
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| Protein sequence | MYQRVRRRKV AEINVVPYID VMLVLLIIFM VTAPLITQGV KVDLPQADAE PLDEDSKTPL
VASVDAQGRY YLTVGANDKE PMSAEEVAIL VKAHLAIEPG TPVVVNGDGA VSYDAVIQLM
VMLQNVAGVP SVGLMTDSVG E
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