| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1724 |
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| Symbol | |
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| ID | 3519257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1771775 |
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| End bp | 1774183 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637284187 |
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| Product | putative ATP-dependent protease LA |
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| Protein accession | YP_268462 |
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| Protein GI | 71279250 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACTT GCCTTGCAGA TCAAACCCGT CTGGGTATTG ATGACCTCAC TTCTTCTTTG
TCAGCTTCAT TATTTTCCGA TGGGATAAAA CCAGTCAATA AAGGCAATGA ATTTGACGCA
CAGGGATTTG TCGGTCATGA AAGAGCAAAA GAGGCTTTAG AATTTGGCTT ATCTATGTCT
GCTATTGGCT TTAATGTTTT TGCTATGGGG GAACATGGCA CAGGGAGGCA AACATTAATT
AAACAAATGT TAACTTCGCT CGCTAGTGCG AAAACGGCAC CAGATGAATG GTGTTATACC
AATAACTTTG ACGAAAGTCA TATTCCGTTA ACGTTGTCGG TTAAGCCTGC TGATGGTAAA
AAATTATTAG TAAGCATGAA TAAATTTATT GATGGCTTAC TGAGTTTATT TCCAGAGGTT
TTTGATAATC CGGGCTACCA AAGACAAAAA TCAGCCATTG ATCGAGAGTT TAATCAAAAA
TACGATCAAG CTATTTCAGT GGTTGAAGAG CTTGCTCTAA AAGAGAATGT GGTTCTGTAT
GAAGAAAATG GCGAAGTAGG TTTTTCACCT TTAGTTGAAG GCAAGCCATT AAGTGATAAA
GAATTTTCTA ATCTAAATGA AACAGATAGA GCTAATTTTT ATAAATCATT AAATGAATTA
GAAAACGTGC TGTCTGAGCA ACTATTAGAG TTACCCTTAT GGAAGCGGCT TTCTTTTGAC
CAGTTACGAA AACTTAAAAG TGATACCGCC GAGAGTGCTA TCAAACCTTA TATAACTGAA
TTAGAAAAAG AGTTTAGTAA TAACGAAGGC GTACTAAGCT ATTTAGGCAA AGTGAAAAGC
CACGTAGTCG ATGCCGTTTT AGAGATTTTA GTAACCGAGT CTGATGATAC CCCTACAGAT
AAAGAATTAC GTAAATTAAT GGTTGAACGA TTTTTACCAA ACCTACTGGT ACCAAGAGAT
AACACACAAG GGGCACCGGT AGTTTATGAA CAAAACCCGA CTTATCAAAA CTTATTTGGT
CATGTCGACT TTGCTAGTTT TCAAGGGAGT AGCTATACCA GTTACCGCTT GATCAGACCA
GGCGCATTGC ACAAAGCTAA TGGTGGTTAC TTACTATTAG ATGCTGATAA AGTGTTAAGC
CAACCTATGG TGTGGTCACG CTTGAAGTTA GCGTTAAAAA CTCAACAGAT CACCATTGAA
AATCCTTATT CAGAATATAG CCCACCTAGC GGATATAGCT TACAGCCAGA AAAAATCCCG
CTGCAAGTTA AAGTAGTACT ACTTGGTGAT GCAGAAATTT ATTACACCTT ACAAGATTAC
GACCAAGAGT TTACTGAGTT ATTTAGAGTC TTAGCCGACT TTGACCGCCA TCTTGATAAA
ACGGATAGTA ATTTAATTGC GTTTGGACAA TTAATCAGAC AACGTGCTGA TAAACATAAT
TATCCTGAAG TGAGTGATGA TGCAGTTTTA GAACTAGTTC GTTATGCCCT TAGACGAGGC
GAACATAAAT ATAAAGTGTC AGCAAATATT GTACAGGTGA ATGATTTACT CGACGAAGCA
AATTACTGTT GGCAAAAGCA GGGTAGCGAA GGCCCATTAA AGGCTCAACA TATTGCTTTA
GCACAAGCCG CTAAAAAACG TCGTATCGGT CGGTTGAGCG AAACATGGCT CAGTGAAATT
AAAGAGCAAC AAGTACTGAT TAATACCGAA GGTGGCTTTA TCGGTAAAGT GAATGGCTTA
ACGGTACTTG AGATAGGAGA TAGTGTTTTT GGTACTCCTG CACGTATAAC GGCAACCGTT
TATGCCGGTA GTGAAGGCGT TACAGATATT GAACGAGAGG TTGACTTAGG TAAGTCTATT
CACTCCAAAG GTGTTTTACT GTTAACGGGT TATTTGGGCC ACAAGTATGG ACAAACATTC
CCTGTAAGTA TTTCTGCCAA CATTGCCATA GAACAATCTT ACGGACATAT AGACGGTGAC
AGTGCTTCTA TGGCTGAACT CTGTGCTCTT ATTTCTGCTA TTACTTTATT ACCAATAGAT
CAAAGTCTTG CGATAACTGG TTCCATTAAC CAACACGGTG AAGTGCAATC AATTGGCGGT
GTAAATGAGA AAATAGAAGG CTTCTTTCAG TTATGCCAAG ATAAAGGTTT AACAGGAACA
CAAGGAGTTA TTATTCCGAA AACTAACGTC ATTAACTTAA TGCTTAATGA TGAAGTGATT
AATGCTGTAG CTCGCGGAGA GTTTTCAATA CATGCCGTTG AAAGTATTGA TCAAGCACTG
GAGTTATTGA TGAATGTGGA TGCTGGCATT ATCAGTAAGA CCGGTCGTTA TCCGCGTAAA
TCTATTCATG GCCTGGCGCT TGATAAGTTA GAGAATTTTT CCGATATACT TAATGGCTCT
GAAGAGTAA
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| Protein sequence | MPTCLADQTR LGIDDLTSSL SASLFSDGIK PVNKGNEFDA QGFVGHERAK EALEFGLSMS
AIGFNVFAMG EHGTGRQTLI KQMLTSLASA KTAPDEWCYT NNFDESHIPL TLSVKPADGK
KLLVSMNKFI DGLLSLFPEV FDNPGYQRQK SAIDREFNQK YDQAISVVEE LALKENVVLY
EENGEVGFSP LVEGKPLSDK EFSNLNETDR ANFYKSLNEL ENVLSEQLLE LPLWKRLSFD
QLRKLKSDTA ESAIKPYITE LEKEFSNNEG VLSYLGKVKS HVVDAVLEIL VTESDDTPTD
KELRKLMVER FLPNLLVPRD NTQGAPVVYE QNPTYQNLFG HVDFASFQGS SYTSYRLIRP
GALHKANGGY LLLDADKVLS QPMVWSRLKL ALKTQQITIE NPYSEYSPPS GYSLQPEKIP
LQVKVVLLGD AEIYYTLQDY DQEFTELFRV LADFDRHLDK TDSNLIAFGQ LIRQRADKHN
YPEVSDDAVL ELVRYALRRG EHKYKVSANI VQVNDLLDEA NYCWQKQGSE GPLKAQHIAL
AQAAKKRRIG RLSETWLSEI KEQQVLINTE GGFIGKVNGL TVLEIGDSVF GTPARITATV
YAGSEGVTDI EREVDLGKSI HSKGVLLLTG YLGHKYGQTF PVSISANIAI EQSYGHIDGD
SASMAELCAL ISAITLLPID QSLAITGSIN QHGEVQSIGG VNEKIEGFFQ LCQDKGLTGT
QGVIIPKTNV INLMLNDEVI NAVARGEFSI HAVESIDQAL ELLMNVDAGI ISKTGRYPRK
SIHGLALDKL ENFSDILNGS EE
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