| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1709 |
|---|
| Symbol | lipA |
|---|
| ID | 3522737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1757175 |
|---|
| End bp | 1758161 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637284172 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_268447 |
|---|
| Protein GI | 71282264 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACG ACTTAACATC AGAATCAAAA ACAGCCAACC GTGCTGCTGG CGAAAAATTT
CGCGATGCAG ATAAATTAGC TCACATCCCT ATTAAAGTTG TTAGTTCAAC AAAAGCGACC
ATGTTACGTA AACCAAGTTG GTTACGTATC AAGTTACCAA AATCTAGTGA ACGTATTGAT
AACATCAAAG CTAATTTACG AAAAAATGAC CTTCATTCTG TTTGTGAAGA AGCATCATGC
CCTAATTTAT CTGAGTGTTT TAACCATGGT ACTGCCACCT TTATGATTTT AGGTGATATT
TGTACGCGTC GTTGCCCTTT CTGTGATGTT GGCCATGGTC GTCCACTGGC TCCAAAAAGT
GATGAACCAA AAAAGTTAGC CAATAGCCTT AAAGATATGG GCTTAAAGTA CGTCGTTATT
ACTTCAGTTG ATAGAGATGA TTTACGTGAT GGTGGCGCAC AGCAATTTGC AGATTGTGTG
AAAGAAATTG GTGAACAAGC GCCAAATACT AAAGTCGAAA TATTAGTACC TGACTTCCGT
GGTCGTATGG ACCGTGCGCT TGAAATACTG AATCAAAACC CTCCACACGT TTTCAACCAT
AATATGGAAA CAGCACCACG TCTTTATACT AAAGTTCGTC CAGGCGCTAA CTATCAATGG
TCATTAGACT TACTTAAACG TTTTGGTGAA GCAAACCCAG ACGTAACCAC TAAATCTGGT
TTGATGGTTG GTTTAGGTGA AACTAACGAA GAAATTTTAG AAGTAATGCA AGACTTACGC
GATCATGGTG TAACTATGCT TACCGTTGGT CAGTACCTTC AACCAAGTAA AGATCACCTT
GCCGTTGAGC GCTACGTTCA CCCTGATGAC TTTGCTATGT TTGAACGTGA AGCAAAGAAA
ATGGGCTATG AACACGCTGC TTGTGGTCCA CTTGTTCGTT CGAGCTACCA TGCTGACAAA
CAAGCTGCTG GTGAAGAAGT TAAGTAA
|
|---|
| Protein sequence | MSNDLTSESK TANRAAGEKF RDADKLAHIP IKVVSSTKAT MLRKPSWLRI KLPKSSERID
NIKANLRKND LHSVCEEASC PNLSECFNHG TATFMILGDI CTRRCPFCDV GHGRPLAPKS
DEPKKLANSL KDMGLKYVVI TSVDRDDLRD GGAQQFADCV KEIGEQAPNT KVEILVPDFR
GRMDRALEIL NQNPPHVFNH NMETAPRLYT KVRPGANYQW SLDLLKRFGE ANPDVTTKSG
LMVGLGETNE EILEVMQDLR DHGVTMLTVG QYLQPSKDHL AVERYVHPDD FAMFEREAKK
MGYEHAACGP LVRSSYHADK QAAGEEVK
|
|---|
| |