Gene CPS_1704 details

Gene Information

• Locus tag: CPS_1704
• ID: 3519315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1748003
• End bp: 1748437
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637284167
• Product: HIT family protein
• Protein accession: YP_268442
• Protein GI: 71279191
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.274737
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAG TAACAACATT TAATTTACAC CCTCAACTAG CAACAGATGG TATTGAGTTG 
GCTGATTTTC CTTTGTGTAA ATTACTACTA TGTAATGATA GTGCTTACCC TTGGTTTATT 
TTAGTACCTA AAGTTGCCGA TATTAGTGAA GTGTTCCAAC TTGAGTGGGA CCAACAGCAA 
CAATTGCTTA ATGAGTCGAG CTTATTGAGT GAGTTATTAA TGCAAGTCTT TGCTGGTGAC 
AAAATGAATG TTGCTGCGTT AGGTAATGTT GTTGAGCAAC TGCATGTTCA TCATGTTGTA 
CGTTTTAAAG ATGATGCACA ATGGCCGAAG CCAATTTGGG GCCAACAACC ATTAACACCT 
TATTCTGATG AAGAAATAGC GACACTCAAA GAAAAGTTAT TACCGCAATT AGCGGTTATT 
TTCTCTGATA AATAA 

 

Protein sequence

MSEVTTFNLH PQLATDGIEL ADFPLCKLLL CNDSAYPWFI LVPKVADISE VFQLEWDQQQ 
QLLNESSLLS ELLMQVFAGD KMNVAALGNV VEQLHVHHVV RFKDDAQWPK PIWGQQPLTP 
YSDEEIATLK EKLLPQLAVI FSDK