Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1703 |
Symbol | rbgA |
ID | 3521267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1746977 |
End bp | 1747909 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284166 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_268441 |
Protein GI | 71280798 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.237834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTA ACTGGTTTCC AGGCCACATG CACAAAGCAC AAAAAGAAAT AAAAGAAATA TTACCGCAAA TTGATGTGGT GATTGAAGTG TGTGATGCGC GTTTACCCTT TAGTAGTGAA AATCCTATGA TCACTGAGAT CAGAGGTGAT AAACCACTGA TAAAGATCCT TAATAAAAGT GATTTAGCTG ATCCTGAAAG CACCAAAGTT TGGTTAGATT ATTTAGAGTC GCAGCATAAT GTAAAAGCGA TTGCTCTAAC CACAGAGCAG CCGAGTGTAG CAAAGAACCT TGTCAACTTA ATACGTAAAC TTGTGCCGAA TAAAGATGAA GAAGGTAAGC AAATTAACGC GATGATAATG GGGATACCTA ACGTTGGTAA ATCGACATTA CTCAATACCT TAGTAGGCAA AGCAAAAGCA AAAGTGGGTA ATGAACCCGC GGTAACTAAG GGGCAGCAAC GTATTCGTCT TGAAGAGGGG TTATACCTTT TCGATACCCC AGGTATGTTA TGGCCTAAAA TAGCGAATGA AAATTCTGGC TATCGTTTAG CGGTATCAGG TGCGGTAAAA GATACAGCAT TTGATCATGA TGATATTGCT TATTTTGCTG CGGATTACCT ACTTAAGAAT TATCCTAAAC GTATAATGGA GCGTTATAAA CTTAGCGAGT TACCTGCACA CGAAGAAGAC TTAATTGAAG CGATTGGCCG TAAACGCAGC TGTATTAAAA GTGGCGGTCG TGTTGATTTG CATAAAGCGT CTGTCATTTT GATAAATGAA ATCCGTGATA AAACCTTGGG TGCTATTTCC TTTGAATTAC CGGATATCAT CGATGCTGAG AACGCGCACT TCACTGAACT TGAAGAGAAA CGCATTGCCG CTAGAGAAGC TAAAAAGGCA GCCCGTGGTC GTGGTCGTAA AAATAAACGT TAA
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Protein sequence | MAINWFPGHM HKAQKEIKEI LPQIDVVIEV CDARLPFSSE NPMITEIRGD KPLIKILNKS DLADPESTKV WLDYLESQHN VKAIALTTEQ PSVAKNLVNL IRKLVPNKDE EGKQINAMIM GIPNVGKSTL LNTLVGKAKA KVGNEPAVTK GQQRIRLEEG LYLFDTPGML WPKIANENSG YRLAVSGAVK DTAFDHDDIA YFAADYLLKN YPKRIMERYK LSELPAHEED LIEAIGRKRS CIKSGGRVDL HKASVILINE IRDKTLGAIS FELPDIIDAE NAHFTELEEK RIAAREAKKA ARGRGRKNKR
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