| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1694 |
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| Symbol | |
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| ID | 3520234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1736397 |
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| End bp | 1740686 |
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| Gene Length | 4290 bp |
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| Protein Length | 1429 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284157 |
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| Product | putative pullulanase |
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| Protein accession | YP_268432 |
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| Protein GI | 71279773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGTC AAAAATCGGT GTTAAGAGTT ATTGTCTTAG CATCAGTATC AATGGTACTT
GTCGCGTGTG GTGGCTCAGA GTCTACCGAG CCAGGTGAAG TACTACTTAG TTGTGATGTG
CCAATGGTTT CTGATGCTGC TGGCACAAGT TGTGTTGCGC CAGAGCCTAT TGAATGTCCC
GTTCCAACGG TGCCTGATGC ATTAAATGAA AGTTGTGTTG TTGGTATAGA TCCCAAGGCA
CCTGAGCCTA TTATTTTTGC AGGCGAAAAT CAGGCGTTGC TATTTTATAA CCGTGCAGAC
GGTGAATACA GTGACTACAA AATGCATAAT TGGAACAGTG CTGAATGTGA TGCGTATGCG
GCAGATTCTT TGGCGCCTTC TTGGGATAAT GGCTTAGCGC ATACCGGGGT TGATCCTGTG
TACGGTGCGT ATTGGTTATT AAATCTTAAA GACGATCATA ACGAATGTGG TCACTTTATT
ATTCACAAAG GCACTGATGA CGCAGGAAAA GAGTTTGGTG GTGGTGATTT TAAAATGCCA
CTGTTTCAGG ATGATGAAAC ATACCAACGT ATGAATTTCA CCTTTTCAGG TGTCGCTTCT
ATTTTTGAAT ATCCTGTTGT AACTTTGGGT AAACAAGCAT TAGCAATTAG TGGTTTTTCA
GCACATTGGA TTGATAGCAA TACCTTTACA TGGAATGTTA ATTTTGATCT GGTTACATCG
GTAAAATTAC ACCATTCAGC GACTGCAGGT ATTGGTGCCG ATGAAGCTAA CGAAGACGTT
ATCACAGGGA CGGTTGTTGA GTTGTCGGAA GTTGATTTAA CTGACGAACA AAAAGCTGCG
GCGCCTTTAG TTGCAGACTG GCCTGCTTTT TCGGGTAATT GGTCAATTGA AGAAGCAAAA
GCGATTGCTA AAAATCAATT GGTTTTAGTT GGTTATAACG CAGAAGGGCT AGCGGTTGCT
GCCACTAATG TGCAAGCTGA TTTAGTATTA GATGATCTTT ATACCAAAGG CGAAATGGAT
GCTAATGAAG CAACGTTAGG TGTTGTTTAT GACAATGGAA CCGTTAAAGT TTCTGTGTGG
TCTCCAACCG CTCAACAGCT TAAATTGAAT GTCTATAACG CGGATAAAGA AATGGTTTCA
AGTCATGATA TGACTGAAGA CTCAATGACT GGTGTTTGGA GTTATACGGG TGATGCAAGT
CTTGACCGTC AATTTTATCG TTTCGCGTTA ACGCTTTATC ATCCAGAAAA TAAAGCGATT
GAAGAAATAG AGAGCACAGA CCCATATTCG TTAAGTTTAT CAACCAATGG TGAATATTCT
CAGTTTGTAA ATTTATCTGA TGAAGATCTA CAACCTGAAG GCTGGGATGG CCATGCAGTA
TCTACCATTG AAAACTACGA AGATGCGGTA ATTTACGAAG GGCATATACG TGATTTTAGT
GCACAAGATG AAAGTACTTC AGTTGAAAAT AGAGGTAAAT TCTTAGCGTT TACTGAAATT
AACTCTGCAC CTATGCAGCA TTTACAAAAG CTAGTCGCTA ACGGTTTAAC GCATTTTCAT
ATGTTACCTG CGAATGATAT AGCAACTATT GATGAAGATG CAGACAAGAT TATCGATTTG
GATAGTACGG TCTTAGCGTT ATGTAAAGTC AATTTCAAAG CACCACCTTG TTATCAGAAT
CTAGATGACC AAACATTGCG TGCTGTTTTT GAAAGTTATT CTCCTTATTC AAACGAGGCA
GTAAAACTAA CAGAAGCGAT GCGTGATACG GATAGTTTTA ATTGGGGTTA TGATCCTAAA
CATTTTAATG TGCCTGACGG TATTTATGCT TCAAATCCAG ACGGAGTAAG CCGGATTAAA
GAAATGCGTG CGATGATCAA ATCCTTGCAT GACATTGGCT TACGTGTGGT ATTAGATGTT
GTTTATAACC ATACTAACTC TGCTGGTTTA TGGGATAACT CGGTACTTGA TAAATTTGTA
CCTGGCTACT ATCACAGCCG TGATGTTACT ACTGGCGCTG TTCAAAATAG TACTTGTTGT
AGTGATACAG CCCTTGAACA TCGCATGATG GACAAGTTGA TGGTCGACTC ACTTAAACAG
TGGACTGAAC AATACCAGTT TGACGGGTTT CGTTTCGATA TTATGAGCCA AGGCTCTAAA
GAACAGATGT TAGCAGCACG TGATGCTATT CAAGCGATAG ACCCTGATAA TCATTTTTAT
GGTGAAGGTT GGTACAAAGA TTCTCGAGGT TTTGAACGCG CTGACCAAGA AAATATGGCC
GGTACTGAAA TTGCCACCTA TAACGATCGT ATTCGTGACG GTATTAGAAA TGCGACTTTG
TTTAACAACG AAAGTGATTC AGACTACCCG TTTGAGCAAC AAGATATTGT TAAATTTGGC
ATGGCAGGCA CGCAAACTGA CTATGTATTG AAAACCTTTA AGGGCACTGA CGTAGTCGGT
AGCTCTGCAG GTATGTATGC CAAGGACCCT GCTGATATTA TTAACTATGT TTCAAAACAC
GATAATGAAA CCTTGTGGGA TATCTTACAA TTTAAGTTAA GCCCTGAAAT GAATAATAGC
GAACGTGTTC GTGCGCAAAA CATTTCTCAA TCAATCGTAT TATTGTCACA AGGTATTCCA
TTTTTACAAA TGGGTGGTGA TTTCCTTCGC TCTAAGTCGT TAGACCGTAA TACTTATGAT
GCCGGTGATT GGTATAACCT AGTTGATTTT ACATTTGAGT TAAATAACTG GAATAAAGGT
TTGCCTCTAG ATAATGGTGG TCGAGACTAC GATGACATAG TTTCTCTAGC GTCAAGTTCA
TCAAGTACTG TTTCAATGAC GGATATATTA TTCGCATCAA ATGTGTTCAA TGAGTTTTTG
TCGATTCGTA CAAGCAGTCC ATTATTTAGA TTGACCACTG CGACAGATAT TATCAATCGC
GTTGGTTTTC ATAATATTGG TAAAAATCAA ACGCAAGGTT TGATTGTGAT GAGTATAGAT
GACGGATCAA CTCTTACTGA TATCGACCCA AATTATGATG CATTAGTGGT TGTGGTAAAT
GGTACTAATA GCGAACAAAC ACATACTATT GCCTCCGCAA GTAATTTTAC CTTGCATCCA
TTATTAGCTG GTTCTGTTGA TGGTACCGTT GCTAGCGCTA CCTTTGAGCA GGGTACAGAT
GAAGGCAGCT TTACGGTTCC TCCGCTAACT ACCGCTGTTT TTGTGAAAGT ACAAGGTGAA
AGCCAAGCAA GCGGTTTATC CGCTTATGTA ACAGCAGGCG CACCTGATGT GGTTCCTTAT
GGCGATACCG TTGCTTACGT TCGTGGAGAG ATGAATGGTT GGAATCCTGA TGATGCATTT
ACTTATATTG GAGATGGAGT CTACCAAGCT AAAATTACCC TTGCAGCAGG ATCTTATGGT
TTCAAGGTGG CAGATTTTGA TTGGTCATCA AACATTAACT TAGGTGCTCC AGGATCAGGT
GGTGAAGTAT TAGAAGATCA AACTTTTAAT TTATTACCGG GCAGTAATGA CAATTTAAGT
ATTACTGTTG CGATTGATGG GACTTACTTC TTTACCCTTG ATGCCTCTAA TACCGACGCT
CCTACTTTGT TAGTAGAAAA TGAAGAGCCG TTTGTTGGAA CACCGATATT TATTCGTGGC
GACATGAATG GTTGGGGTGA AGATAACGAA TTAATTTATA TAGGTAATGG TAAATATCAA
GCCACTATAA CCATTAGTGT TTCAACGCCT AGCTTTAAAA TAGCTTCCGC TGATTGGTCT
ACAGTAAATA TGGGCGCACC AGCTGATGAT ATGGAAATAA CTGAAGGTGA AAATCAATTA
TTGTTATCAG GTAGTGGTGA TAACTTCAGT ATGAACTTTA CTGTCGATGG AGATTACACT
TTTGTTTTTG ACGCCTCTGA TTTAGCTGAA GCAACGTTGA GTATATATTC AGCTGAAATA
TTTGGTGCCA CACCGGTATT TATTCGTGGT GACATGAATG GTTGGGGTGA AGTTGATCAG
CTTAGTTATG CTGGTGCAAG TAGTTATTCA GTGGAATTAA ACCTAACCGC AGGTGACTAT
GGCTTTAAAA TTGCCTCGGG TGATTGGTCA ACATTCAATT TAGGTGCGCC GGCGGACACT
AGCGTTGTTG CCCTGGATTC TCCGTTAACA TTATTACAAA ACTCACAAGA TAATTTGAGT
GTCACTATTG TAGATGATGG TGTTTATATT GTTACGGTTA CAGGGCCTGA TCCGACAACA
CCGACTATCA ATATTAGCAA AAAACTGTAA
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| Protein sequence | MFSQKSVLRV IVLASVSMVL VACGGSESTE PGEVLLSCDV PMVSDAAGTS CVAPEPIECP
VPTVPDALNE SCVVGIDPKA PEPIIFAGEN QALLFYNRAD GEYSDYKMHN WNSAECDAYA
ADSLAPSWDN GLAHTGVDPV YGAYWLLNLK DDHNECGHFI IHKGTDDAGK EFGGGDFKMP
LFQDDETYQR MNFTFSGVAS IFEYPVVTLG KQALAISGFS AHWIDSNTFT WNVNFDLVTS
VKLHHSATAG IGADEANEDV ITGTVVELSE VDLTDEQKAA APLVADWPAF SGNWSIEEAK
AIAKNQLVLV GYNAEGLAVA ATNVQADLVL DDLYTKGEMD ANEATLGVVY DNGTVKVSVW
SPTAQQLKLN VYNADKEMVS SHDMTEDSMT GVWSYTGDAS LDRQFYRFAL TLYHPENKAI
EEIESTDPYS LSLSTNGEYS QFVNLSDEDL QPEGWDGHAV STIENYEDAV IYEGHIRDFS
AQDESTSVEN RGKFLAFTEI NSAPMQHLQK LVANGLTHFH MLPANDIATI DEDADKIIDL
DSTVLALCKV NFKAPPCYQN LDDQTLRAVF ESYSPYSNEA VKLTEAMRDT DSFNWGYDPK
HFNVPDGIYA SNPDGVSRIK EMRAMIKSLH DIGLRVVLDV VYNHTNSAGL WDNSVLDKFV
PGYYHSRDVT TGAVQNSTCC SDTALEHRMM DKLMVDSLKQ WTEQYQFDGF RFDIMSQGSK
EQMLAARDAI QAIDPDNHFY GEGWYKDSRG FERADQENMA GTEIATYNDR IRDGIRNATL
FNNESDSDYP FEQQDIVKFG MAGTQTDYVL KTFKGTDVVG SSAGMYAKDP ADIINYVSKH
DNETLWDILQ FKLSPEMNNS ERVRAQNISQ SIVLLSQGIP FLQMGGDFLR SKSLDRNTYD
AGDWYNLVDF TFELNNWNKG LPLDNGGRDY DDIVSLASSS SSTVSMTDIL FASNVFNEFL
SIRTSSPLFR LTTATDIINR VGFHNIGKNQ TQGLIVMSID DGSTLTDIDP NYDALVVVVN
GTNSEQTHTI ASASNFTLHP LLAGSVDGTV ASATFEQGTD EGSFTVPPLT TAVFVKVQGE
SQASGLSAYV TAGAPDVVPY GDTVAYVRGE MNGWNPDDAF TYIGDGVYQA KITLAAGSYG
FKVADFDWSS NINLGAPGSG GEVLEDQTFN LLPGSNDNLS ITVAIDGTYF FTLDASNTDA
PTLLVENEEP FVGTPIFIRG DMNGWGEDNE LIYIGNGKYQ ATITISVSTP SFKIASADWS
TVNMGAPADD MEITEGENQL LLSGSGDNFS MNFTVDGDYT FVFDASDLAE ATLSIYSAEI
FGATPVFIRG DMNGWGEVDQ LSYAGASSYS VELNLTAGDY GFKIASGDWS TFNLGAPADT
SVVALDSPLT LLQNSQDNLS VTIVDDGVYI VTVTGPDPTT PTINISKKL
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