| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1693 |
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| Symbol | |
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| ID | 3519265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1733225 |
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| End bp | 1736248 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284156 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_268431 |
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| Protein GI | 71279219 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACAT TTAAACCGAG TAAGCTCTCT ATAGCCTTAC TTTCCTGTGG TTTTATGGTG
TCTTCTGGCG GGCTTTATGC TCAAGAAGCG GTGAAAGCCA CACCCGAACC AGAAAACGTT
GCCGCAAAAA AGAGTGATGA ACAAGAGGTT GACGCAATCG AAGTGATTGA AGTGACTGGC
TTTAGACGTT CACTTATTAA ATCTATTAAT CAGAAACGTT TTGCGGATAC GGTATCAGAG
CAAATAACTG CTGATGATTT AGGCGCATTG CCTGATGTTT CAATGGCTGA TGCGTTAACA
CGTTTACCGG GTATTTCTGC CGTAAGAACA GGTGGGCAGG CCGCTGAGAT TAATATTCGT
GGTATGTCAG GCGGTTTTGT ATCGACAACA TTAAATGGTC GCGAGCAAGT ATCAACCAGC
GGTCAGCGTA GCGTTGAATT TGACCAATAT CCATCAGAAC TTATATCACA AGCCTCAGTA
TTCAAATCAC CCAAAGTATC GCTTATTGAA GGTGGTGTGG CAGGTACGGT TGAATTAAAA
ACTGCCAGCC CTTTAAAAAA TGAAGACAAG CATTCTTTTA ATGTAAATGC TCGTGGGATG
TATAACGATT TGGCAAGTGA CGTACCTGAT GCCACATCAA CTGGTCATCG TTTTAGTGTT
TCCTACCAAG GTAAATTTGC TGATGACACC TTTGGTGTCG CTCTAGGTTA CGCGCGTTTA
TTTCAACCAA GTGCCACCAC ACAATTTGTT GGCCTTAACT ACAGTAAATT AAGAGATGTA
GACGGCTTAG CTGATGATAC CAATGGACCA ACCAAGGAAG AGGGGATTCA CCTAGCTAAA
GAATATGTTG GTGAAGGTTT TGAGTTGCAA CACAAAGGAG GGGAAGAAAC CCGAGATGGT
TTTGTAGCGA CCCTTGAGTG GCAGCCCGCT GATAACTTTA GTCTAAAATT TGATAGTTTC
TATTCGAAAT TTGATTCGGA AGAGTTTGCC CGTGGTTATC GAGTGAAATT TGATGGCAGC
CAAGCGGCAA TAGGTAATGC CACCATTATA GACAATTCAG TCATAGGCGG GACGTTCAAT
CGAACGTCTA ACAGTTCAAC GCGTGTTGAA ATTGTTAATG ATGACAACAG TGATTCTGAT
GAAGTACAAA GTTTTGGGAT AAATGCCGAC TGGCAAATCA CTGATAATTT TAATATGGCG
GTAGATTTAT CGTATTCATC AGCCACCAGT GATTTTAGAA ATGGCTTGAT TTGGTCATTA
GTTGCTGATG ATGCTAATGC TGCGCAACCT GAATTTGATA ATAATGTTTC AATTAATTAC
TTATTAAACG GCTTAGATTT ACCTGATGTC AGTTTAAATC AAGCTGATGC TTTAACTGAT
TTAAGTCGCG TTATGGTAAC TAAATACGGT ATTTATCCTT ATGTGAATTC TGATGAAGTT
ATTGCAGCTC GTGTTGATTT TCAGTACTCC CTTGATTCAG ATTATATTTC GTCTGTAGAA
TTTGGCGCAC GTTATTCTGA AAGAGAGTAC AGCAGCGATC GTTCAGTATA TGAATTTGGT
AGTGATAGTG GCTTTAATTC GAAAGAAAAA CCCTTAAATA TCACTGAAGA TATGGCGACC
GTGGTTGACT GGAAGGGCGA TTTTTCTTCT TTTCCAAGTT ACTTAGCACT TGATCAAAAC
AAAGTATTAA ATGCTTGGTT TCCTCAGGGC ATTCCTCAAC CGGTGCAAAC ATGGGGCGGC
TCTGCAAGCG GTGTAATTAA TGGCGATCCA TTAGGTAAAG ATACAGCTTG GACCGTGAAA
GAAAGTGGTC AAGTTTTTGA AGATATCTTT GCGGCCTATA TCATGGCAAA TATTGATGTA
GAAATTGGTG ATATTCCGGT AACTGGTAAC TTTGGTGTTC GTGTTGTTAG AACTAAACAA
GCGTCTACTT CATTGCAAGA TGTTGGTGAA ACAAGGGTAA AAGATGCGTA CGGACAAGAC
GCTATTGACG AAAATGGCGA TGTTATTGTT CAAGCGAATG CAGATTTAGG TGCGCAGTTT
ATTACAGATG ATGCTGGCCT AATCAATCAA AAATATGCAC CGGGTATTAT CGAAAATACT
TACACCGATT ACCTGCCTCA AATGAATTTA AATTTTCATA TAACGCCGAA CGACCAAATA
CGTTTTGCTG CGGCTAAAGT AATGAGTCGT CCTAATATTG ACCGACTTGC TTCTAACAGC
AGTGTGAGCA TCAACAAAGT AACAACTGAC AGTGGCACTT ATGCTGAAAT CAGTGGTAAC
GCGAAAAACA GCCCACATTT AAAACCGTTT TATGCCAATC AGTATGATAT TTCCTATGAA
CGATATTTTT CAGAATCTGA TGGTAGTTTC GTTTTTGCGA TTTTTTATAA AGACATAGAA
TCGGCTGGTA TTGTTACGCA AACAATCAGT GAATATGACT TTGCTGGTAA TGGCTTAATA
GTGCCAGACG AATTTATCGA TCCGTTAAGT GGTGTGCCAT TAGAAATTCG TAACGGTAAT
TTTGAAACCG CGTTTAATGA TGATAAAGGC GGTTATATAA AAGGGCTTGA AGTGAGTTAC
ACCCAAATCT TTTCATTCTT ACCTGATTTT TGGTCTGGCT TAGGACTTAG TACAAGTTAC
TCACATACCA AAAGTGAAAT TCAACAAATT TCACAATTAG GACAGCAAGA CTTACCTATT
ACACTGCCCG GCTTATCTGA AAATGTTTTA CAAACGACAC TTTTCTGGGG TTATGAGGGT
TTTGAAACCC GCATTAGTGC GCGTTATCGA GATGAGTTTG TATCAGAGCA AGTAGCGGTT
GAAGCACAAA CGGTTAATTA CGATGACGAA CTAGTCATCG ATTATCAGGC TTCTTATCAG
TTTAATGACA ATTTAGGTGT GGTTTTTCAG GTGAACAACG TAACCGACGA ACCGACTAAA
AGTTACTTTG GCGTACAAAG CCAAACGGGC ACCATTCAGT ACTTTGGTCG TCAATTCTTT
TTAGGCATGA CCTACGCGTT ATAG
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| Protein sequence | MRTFKPSKLS IALLSCGFMV SSGGLYAQEA VKATPEPENV AAKKSDEQEV DAIEVIEVTG
FRRSLIKSIN QKRFADTVSE QITADDLGAL PDVSMADALT RLPGISAVRT GGQAAEINIR
GMSGGFVSTT LNGREQVSTS GQRSVEFDQY PSELISQASV FKSPKVSLIE GGVAGTVELK
TASPLKNEDK HSFNVNARGM YNDLASDVPD ATSTGHRFSV SYQGKFADDT FGVALGYARL
FQPSATTQFV GLNYSKLRDV DGLADDTNGP TKEEGIHLAK EYVGEGFELQ HKGGEETRDG
FVATLEWQPA DNFSLKFDSF YSKFDSEEFA RGYRVKFDGS QAAIGNATII DNSVIGGTFN
RTSNSSTRVE IVNDDNSDSD EVQSFGINAD WQITDNFNMA VDLSYSSATS DFRNGLIWSL
VADDANAAQP EFDNNVSINY LLNGLDLPDV SLNQADALTD LSRVMVTKYG IYPYVNSDEV
IAARVDFQYS LDSDYISSVE FGARYSEREY SSDRSVYEFG SDSGFNSKEK PLNITEDMAT
VVDWKGDFSS FPSYLALDQN KVLNAWFPQG IPQPVQTWGG SASGVINGDP LGKDTAWTVK
ESGQVFEDIF AAYIMANIDV EIGDIPVTGN FGVRVVRTKQ ASTSLQDVGE TRVKDAYGQD
AIDENGDVIV QANADLGAQF ITDDAGLINQ KYAPGIIENT YTDYLPQMNL NFHITPNDQI
RFAAAKVMSR PNIDRLASNS SVSINKVTTD SGTYAEISGN AKNSPHLKPF YANQYDISYE
RYFSESDGSF VFAIFYKDIE SAGIVTQTIS EYDFAGNGLI VPDEFIDPLS GVPLEIRNGN
FETAFNDDKG GYIKGLEVSY TQIFSFLPDF WSGLGLSTSY SHTKSEIQQI SQLGQQDLPI
TLPGLSENVL QTTLFWGYEG FETRISARYR DEFVSEQVAV EAQTVNYDDE LVIDYQASYQ
FNDNLGVVFQ VNNVTDEPTK SYFGVQSQTG TIQYFGRQFF LGMTYAL
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