Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1686 |
Symbol | |
ID | 3519116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1728178 |
End bp | 1729065 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284149 |
Product | ISCps9, transposase orfB |
Protein accession | YP_268424 |
Protein GI | 71278275 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.397431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAACGG TATCTGGCGG AAGTCCATCA GAGCGATTTG GATTCATCGA AAAACACAAA GAAGCCTTAG GTGTTAAATA CCTTTGCTCA TGGCTTGATG TCTCTCGTAG TGGCTTTTAT GCATGGCGAC GACGTCCACG TTCAATGCGT GCTATTAATG ATGCGGATTT ACTTTTAAAT ATCAAACAAG TCTTTAATAA CAATCATCAA ACCTACGGCA GCCCACGCGT ATTTCATGCA TTAAAGCGTG AAGGTATTAC AACGAGTGAG AAGCGTGTTG CACGGTTGAT GCGAGAAAAT GGCTTACGCG CTAGAGCGCT CAAGACTTAT AGCAGGCCAG CTAAGGTGAA GTTCTTTTAT AAAGCGATCA AAAACAATCG TAAAAACATA AGTAAGCCTG ATGCTATCAA TCAGCAATGG TCGGGAGATA TTACGTACCT GAAAGTAGGA TCGCGCTGGT ATTACTTAGC CGTTGTATTA GATTTATTTT CACGTCGTAT CATTGGTTGG GCTTTTGGTC AGAACAAATC AACAGCGCTG ACACTGAAAG CGCTGCAGCT AGCAATAAAG AAGCGTAAAC CGACACAACC CTTGTTATTT CATACTGACA GAGGCGCTGA ATATCGAGCA CATGTAGTGC AGCAGTTCTT AGTTAAACAT AACATTACGG CGAGTATGAA CCGTCCAGGT TGTTGTACTG ATAATGCTGA AGTTGAATCA TTTTTTCATT CATTAAAAGC TGATTTAATC AGAGGGAATG TCTTCGCGAC TACTGATAAA TTACATTCAA AATTAAAAGG TTACATGAAC TATTTTTACA ATAGACAACG ATTGCATTCA AGTTTAGGAT ATAAAACACC TGCTGAGTTT GAATTGGCGG TGAATTAA
|
Protein sequence | MATVSGGSPS ERFGFIEKHK EALGVKYLCS WLDVSRSGFY AWRRRPRSMR AINDADLLLN IKQVFNNNHQ TYGSPRVFHA LKREGITTSE KRVARLMREN GLRARALKTY SRPAKVKFFY KAIKNNRKNI SKPDAINQQW SGDITYLKVG SRWYYLAVVL DLFSRRIIGW AFGQNKSTAL TLKALQLAIK KRKPTQPLLF HTDRGAEYRA HVVQQFLVKH NITASMNRPG CCTDNAEVES FFHSLKADLI RGNVFATTDK LHSKLKGYMN YFYNRQRLHS SLGYKTPAEF ELAVN
|
| |