| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1674 |
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| Symbol | |
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| ID | 3523044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1722253 |
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| End bp | 1722798 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637284137 |
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| Product | alkylhydroperoxidase AhpD family protein |
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| Protein accession | YP_268412 |
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| Protein GI | 71282569 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTTA AATTACATAC GCAAGAATCA TCCCCAGAAG AAAGTAAAGC ACAGTTAGAC
TCTTCATTAA AATCCTTTGG CATGATACCT AATTTACATG CGGTAATGGC AGAAGCACCG
AACGTTTTGA AAGCATACAA ATTACTGCAT GATTTGTTTC AAAAGACGAG TTTTGATAAT
GAAGAACTAA CCGTTATTTG GCAAACGATT AACGTAGAAA ATGATTGTCA TTATTGTGTG
CCTGCACACA CAGGCATTGC AAAAATGATG GGTATTGATG ATGAAATTAC TGAGGCATTA
AGAAATAGCA CTACATTGCC GACTCAAAAA TTACAGGTAC TACATGAAAC CACGCTAGCT
TTAGTGCGCG ATAGGGGGCG TCCAGATCCC ACGATAATCT CTTCATTTTA TCAAGTAGGC
TATGAAAACC GTCAATTGTT AGAAATAGTG CTAGGCATTT CTCAAAAAAT AATGAGTAAC
TATATAAATC ATTTATCCGA AACGCCTATA GATGAAGCTT TTAAAGAGTT CGCTTGGTCA
AAGTGA
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| Protein sequence | MNFKLHTQES SPEESKAQLD SSLKSFGMIP NLHAVMAEAP NVLKAYKLLH DLFQKTSFDN
EELTVIWQTI NVENDCHYCV PAHTGIAKMM GIDDEITEAL RNSTTLPTQK LQVLHETTLA
LVRDRGRPDP TIISSFYQVG YENRQLLEIV LGISQKIMSN YINHLSETPI DEAFKEFAWS
K
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