| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1655 |
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| Symbol | |
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| ID | 3521008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1704235 |
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| End bp | 1705188 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284118 |
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| Product | histone deacetylase family protein |
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| Protein accession | YP_268393 |
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| Protein GI | 71280542 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTAG GAATAATAGG CCACTATCGA TGTGGCGAAC ATAATATGGG TGAGCATCAC
CCGGAAAATG GTAAGCGCTT AACGGCTATT TCAGACCAAT TAATTCGAAG CGGTTTAGAT
TATGTGGTGC GTCAATTTGA TTCTAAACCT ATCGATAAAA GCTTGCTAGC CTTAGCGCAT
ACGCAAGAAC ATATCGATTT TGTTTTTGAT AATGCCCCAA ATGAAGGTGA AGAAAATTTT
ACCGTGGGTG AAGATTCTGT GATGAATGAA AAAACCCTCA CTTCTATTAT GTATTCAGCA
GGCGCTGCTG TTGATGCTGT AGATTTAGTG ATGGAAGGCA CCTTAGGTGC TGCATTTTGT
GCCACAAGGC CCCCTGGTCA TCACGCAGAA CACGATAAAG GCATGGGTTT CTGCTTTTTT
AATAACGTCG CTGTAGCTGC CGCGTATGCC AAACAAAAGT ATGGTTTAAA ACGCGTCGCA
ATCGTGGATT TTGATGTTCA CCACGGTAAC GGCACTGAAG ATATTATAAC CAATCATTTT
AATGCCACCC CTGAAGATGA CAAAGGTTAT CTATTTTGCT CAAGCTATCA ATATCCGCTC
TACCCGTTTG AAATTCAGGA GAGTGATACT CCGCCGATTA TCAATACACC ATTAGCCGCA
ACCACTAAGG GAGAGCAGTT CCGTGAAAAA TTAACTGCAC ACTGGTTACC TGCCTTGCAT
AAATTCAAAC CTGAACTGAT CCTTATCTCG GCTGGTTTTG ACGCCCATAT TGAAGATGAG
ATGTCACACG TTAGCTTAAC AGAGGCAGAT TATCGTTGGA TCACCGATGA ACTTAAAATC
ATCGCTGAAG AATATGGTAA AGGCAGAATT GTTTCTGTGC TTGAAGGCGG TTATGCACCC
AGTGCGTTAG GAAGAAGTGT CGTTGCTCAT GTTAATGGTT TGATTGGTAA TTAA
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| Protein sequence | MPVGIIGHYR CGEHNMGEHH PENGKRLTAI SDQLIRSGLD YVVRQFDSKP IDKSLLALAH
TQEHIDFVFD NAPNEGEENF TVGEDSVMNE KTLTSIMYSA GAAVDAVDLV MEGTLGAAFC
ATRPPGHHAE HDKGMGFCFF NNVAVAAAYA KQKYGLKRVA IVDFDVHHGN GTEDIITNHF
NATPEDDKGY LFCSSYQYPL YPFEIQESDT PPIINTPLAA TTKGEQFREK LTAHWLPALH
KFKPELILIS AGFDAHIEDE MSHVSLTEAD YRWITDELKI IAEEYGKGRI VSVLEGGYAP
SALGRSVVAH VNGLIGN
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