Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1641 |
Symbol | |
ID | 3522388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1691493 |
End bp | 1691906 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637284104 |
Product | DNA-binding protein |
Protein accession | YP_268379 |
Protein GI | 71281916 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTTA AAAAATTAAG AGAGAAACGG AATTGGTCTC AAGAGCAACT TGCAATAATG GCTGGATTAA GTACGAGAAC AATCCAGCGA ATTGAAAGTG GTAATAAAGC TAGTATTGAA TCTCTAAAAT CACTCGCCTC TGTTTTTGAA ATAGATATTT CTAAACTAAA AGAGGAAATC ATTGTGATAG ATAAAAGTTC GGAATCATGG AAATCAGAAT CATTTTTAGT GAAATTTTTT TTCTGGGGTG TTAAAGCGAG AAAGCAGGTT TTAACTATGG AGTTTCTTTG TTTGGCATTG GGCATTTTAA CTTGGATTGT AAAGCCAGAT ATATTTGCTA CTCCAGCATT CTTTCTCTTG GCTTATATAT TTGCAACAAT GAAATATTAT ATTGATCGTA AAAAGCATTG GTAA
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Protein sequence | MIVKKLREKR NWSQEQLAIM AGLSTRTIQR IESGNKASIE SLKSLASVFE IDISKLKEEI IVIDKSSESW KSESFLVKFF FWGVKARKQV LTMEFLCLAL GILTWIVKPD IFATPAFFLL AYIFATMKYY IDRKKHW
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