| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1637 |
|---|
| Symbol | |
|---|
| ID | 3519338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1688925 |
|---|
| End bp | 1689485 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637284100 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_268375 |
|---|
| Protein GI | 71279175 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAA TTAAAAGTTT AGCGACAGAA CGTTTGATCT TAAGACAGTG GAAGAGCGAA
GATAATATTC CGTTTGCAGA GTTAAACGCA TGTAAAGATG TAATGGAATA CTTTCCAAAC
ACTTTAACTG AGATTGAAAG TACCAATTTA GCTTTAAAAC TTTCGCAATT AATATCTGAA
CGTGGTTGGG GACTTTGGGC TGTAGAAGAA AAGCAATCGA ATAAATTTAT GGGTTTTGTT
GGTTTACATA ATTCACCCGC AGAACTTGAA ATAAGTCCAG CAACAGAAAT TGGCTGGCGT
TTATCAAAAA AATTTTGGGG TAAAGGTTAT GCTACAGAAG CTGCTGAGAA AGTTTTAGAG
TTTGCATTTA GTGACTTAAA TATTGCTAGT GTTGTTTCAT TTACAGCAGT TGTGAATAAA
CCTTCGGTGA AAGTTATGGA GCGTATAAAA ATGACCAATA CAGAGCAAAA CTTCCAACAC
CCATTAGTTA ATAATATTAA ATTGAAAGAG CACGTTCTTT ATAAAATAAC AAAAGAAGAG
TGGCTATCCA AAACCTTATA A
|
|---|
| Protein sequence | MNPIKSLATE RLILRQWKSE DNIPFAELNA CKDVMEYFPN TLTEIESTNL ALKLSQLISE
RGWGLWAVEE KQSNKFMGFV GLHNSPAELE ISPATEIGWR LSKKFWGKGY ATEAAEKVLE
FAFSDLNIAS VVSFTAVVNK PSVKVMERIK MTNTEQNFQH PLVNNIKLKE HVLYKITKEE
WLSKTL
|
|---|
| |