| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1635 |
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| Symbol | umuD1 |
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| ID | 3518893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1686806 |
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| End bp | 1687219 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637284098 |
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| Product | umuD protein |
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| Protein accession | YP_268373 |
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| Protein GI | 71278481 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAA TACCCGTTTA CATTGAAGCA GGAATATCCG GCTTTGAATC ACCCGCAGCA
GAATATCGAG AACTAAATCT CTCATTAGAG GAGTTACTTC TTCAGCACCC TAATGCGACT
TTCTTTGGTC TCGCTAATGG ACGCTCAATG GAAGGCAGAG GGATTTTTAA TGGCGATGTG
CTTGTTGTTG ATAGGGTGGA GCATATTAGT AATGGCTCTG TCATTGTAGC AAATTTTAAT
GGGTGCTTTG TGTGCAAAAT AATTGATACC GATAATGCAT TATTGTTATC TGCCTCTGAC
GAACACAAGC CCATTAAAAT AAGCGAAAGC GATGACTTTC AAATAGAAGG AGTAGTAAAT
GTTTCCTTCA GGTTGCACAA AAAACTCCCC GTACTGCTGT CATGTTTGGG TTAG
|
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| Protein sequence | MKVIPVYIEA GISGFESPAA EYRELNLSLE ELLLQHPNAT FFGLANGRSM EGRGIFNGDV
LVVDRVEHIS NGSVIVANFN GCFVCKIIDT DNALLLSASD EHKPIKISES DDFQIEGVVN
VSFRLHKKLP VLLSCLG
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