Gene CPS_1627 details

Gene Information

• Locus tag: CPS_1627
• ID: 3521142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 1678921
• End bp: 1679571
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637284090
• Product: hypothetical protein
• Protein accession: YP_268365
• Protein GI: 71280674
• TIGRFAM ID: [TIGR02595] PEP-CTERM putative exosortase interaction domain

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.4529
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAA TAATAACTCA GATGGCGCTA ACAGCAGTAA TTGGTTTAAC TTTATCAATA 
CCTGCCAATG CAGGCATCAT CATCAACGAA ATATTTCAAA ACCCATCTGT GGTTACTGAT 
TCTAATGGTG AATGGTTTGA GCTATTCAAT TCAGGTTTAA CTGATATCGA TATAAATGGA 
TGGACATTTG GTGATAATGA TATTGATAGT CAGGTCGTTA ATAATGGTGG TTCATTAATC 
ATTTCATCTG GTGGCTTTTT GGTTTTAGGT AGAAACGCCG ATACCTTAAC CAATGGTGGT 
ATATCTGTAG ATTACCAATA CAGTGCAGTA TTCTTGGCAA ATGGCGCTGA CGAATTAGTT 
TTATTTGATG ATGTATTGAA TGAAATTGAC CGTGTAGAGT GGGATGGTGG TCCAGTATTT 
CCTGACCCTA CTGGTGCCTC TATGGCACTA ACATCAATAT CGCTTGATAA TAACTTAGGT 
AGCAGCTGGG AAACATCTAC TTTTTTACAC GCAAGTGGCG ACTTTTCGAC TGCTGGAAGA 
TGTAATGATG ATGTTGGCCA AGTATGTAGT GTCTCAGTAC CTGAGCCATC TACACTTGCT 
ATTTTTGCAT TAGGAATGAT TGGTTTAGCG TCACGTCGCT TTAAGAAATA G 

 

Protein sequence

MLKIITQMAL TAVIGLTLSI PANAGIIINE IFQNPSVVTD SNGEWFELFN SGLTDIDING 
WTFGDNDIDS QVVNNGGSLI ISSGGFLVLG RNADTLTNGG ISVDYQYSAV FLANGADELV 
LFDDVLNEID RVEWDGGPVF PDPTGASMAL TSISLDNNLG SSWETSTFLH ASGDFSTAGR 
CNDDVGQVCS VSVPEPSTLA IFALGMIGLA SRRFKK