| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1617 |
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| Symbol | |
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| ID | 3521521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1664999 |
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| End bp | 1665913 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637284080 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_268355 |
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| Protein GI | 71281052 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.583151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGATTCCC TTAGCTCCAT TCTTAAAAGT GTTCGATTAC AAGGCAGTGT ATACTTTAAT
GCCTGCTTTG CTTCCCCATG GGGACTGGAT TTAGACCAGA ACCAACGAGC CTATTTCCAC
CTAATTATCC GTGGAGCATG TTATTTGCAG CTAGGTGATA AAAAAGAGCA GCTACAAGGG
GGAGATATTA TTATTCTGCC TCATGGAACA GCTCACCAAC TTTTTGATGA CCCATCTTCA
GTGCGCGTTA ATGCTACAGG GGTAGTTCCT GGTTTGATTG ATGGCATTAA CCCTTTTGAG
GGAGTCGGGC ATAGTCAAGA TATTGATATC CTGTGTGGTT ATTTTAATTT TAATAACTCG
ACACCTAGTT ATTTTTTAAA TGCATTACCT GATGTAATAC ATCTAACACA AGAACATAGA
ACCCATTTTT CGTTTTTAGA TAATGCACTT TCTTTCATTA CGCAAGAAAC AAAAATGAAA
AATCTCGGCA GAGAAATTTT GATTGATAGA GTTACCGAGT TATTGTTCGT GCAAATAATG
CGTGTTTATA TAAATATTAA TGGAAATGAA GAGAATATTT TCTCAGCGTT AAGTGACAGA
ACTCTTTCGG AAGCATTACA ACTTATGCAT ACAGAGTCGG ACAAAAACTG GACGGTTGAA
AGCTTGGCTA AAGCAATCGG TATGTCTCGG TCTCGCTTCT CCGAGCATTT CCATAATTAT
ATTGGCGAAA CTCCCATGCG TTATTTGCAT ACTTGTCGAA TGGAAGTGGC AAAACAAAAA
ATTGAAGAAA CAGAATCAAC GTTAAACATA ATATCTGAAG AAGTTGGCTA TGCTTCTGAC
AGTGCTTTTA AGAAAGCCTT TAAAAAGTTT TTCGGTAATA CGCCAAGTAC TTTTCGACAA
AAAAATGATA AATAA
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| Protein sequence | MDSLSSILKS VRLQGSVYFN ACFASPWGLD LDQNQRAYFH LIIRGACYLQ LGDKKEQLQG
GDIIILPHGT AHQLFDDPSS VRVNATGVVP GLIDGINPFE GVGHSQDIDI LCGYFNFNNS
TPSYFLNALP DVIHLTQEHR THFSFLDNAL SFITQETKMK NLGREILIDR VTELLFVQIM
RVYININGNE ENIFSALSDR TLSEALQLMH TESDKNWTVE SLAKAIGMSR SRFSEHFHNY
IGETPMRYLH TCRMEVAKQK IEETESTLNI ISEEVGYASD SAFKKAFKKF FGNTPSTFRQ
KNDK
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