| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1602 |
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| Symbol | mccB |
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| ID | 3522786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1648264 |
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| End bp | 1649871 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284065 |
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| Product | methylcrotonyl CoA carboxylase, beta subunit |
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| Protein accession | YP_268344 |
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| Protein GI | 71282313 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAAAA TAATAAGTAA GATAAACACT CGCAGCCAAG ACTTTCTTGA TAATGCTGCT
CATATGCAAA CCCAAGTTGA TGATTTACGA GAAAAACTCG GTGAAATAAA ACTTGGCGGT
GGCGAACGAT CTCGAGAGCG ACATATCGGA CGTGGTAAGT TATTACCAAG AGATAGAGTC
AATGCTTTAC TAGACGATGG CTCAGCATTT TTAGAGTTCT CGCAACTTGC CGCTTACCAG
GTTTATGATG ATAACGTGCC TAGTGCCGGT ATTATCACAG GTATAGGCCG AGTGGCTGGT
CAAGAGTGTG TTATTGTTGC CAATGATGCC ACGGTTAAAG GGGGTACTTA TTACCCACTC
ACAGTAAAGA AACACCTTCG CGCACAATCT ATTGCAAAAG AAAACAACCT ACCTTGTATT
TATTTAGTCG ACTCTGGTGG CGCAAACTTA CCAAACCAAG ATGATGTGTT TCCAGATAAA
GAGCACTTTG GTCGAATTTT CTTTAACCAA GCGAATATGT CAGCCAATAA CATTCCTCAA
ATTGCTGTTG TTATGGGCTC TTGTACTGCG GGTGGTGCAT ATGTTCCTGC AATGGCTGAT
GAGTCAATTA TTGTTAAAGA GCAAGGCACT ATATTCCTAG CGGGACCTCC ACTAGTTAAA
GCAGCGACAG GTGAAGTTGT GAGCGCTGAA GATCTTGGTG GTGCGGATGT ACATTGTCGT
ACTTCAGGTG TTACCGATCA TTATGCACAA AACGATCACC ATGCTCTTGA AATAGCACGT
TCTGCTGTTA AAAACTTAAA CCGAGTAAAA CCGGTAACAA TAGATTTCAA ACAAGTTGTT
GAACCCGAAT ATCCAACTGA CGATATTTAC GGCATTATTC CTAAAGATAC TCGTCAGCCT
TATGATATAC GTGAAGTTAT TGCTCGTATT GTTGATGGCA GTGAATTCGA CGAATTTAAA
GCCCTTTATG GCAATACCTT AGTTTGTGGT TTTGCCAATA TTTATGGCTA TCCTGTTGGT
ATTGTCGCCA ATAATGGGGT GTTATTTGGT GAGTCTGCTG AAAAAGGTGC ACATTTTATT
CAACTATGTG CACAACGAAA AATTCCTCTA GTATTCCTAC AAAACATCAC TGGCTTCATG
GTGGGTAAGC AGTACGAATC AGGCGGTATA GCTAAACATG GTGCCAAAAT GGTTACCGCT
GTAGCTACGG CGCAAGTACC TAAGTTTACC ATTTTAATTG GTGGTAGTTT TGGCGCAGGA
AACTATGGCA TGTGTGGTCG AGCTTATGAT CCACGCTTCT TATTTATGTG GCCAAATTCA
CGTATATCTG TGATGGGTGG CGAGCAAGCA GCTGGCGTTA TGGCGCAAGT AACACGTGAT
AAAAAAGAAA AACTCGGTGA AAGCTGGAGC GAAGCCGAAG AGCAAAGCTT TAAACAACCT
ATCATCGATA ACTATGAACA CCAAGGTCAT CCTTATTACG CCTCGGCGCG TTTATGGGAT
GATGGCATTA TCGACCCTGC TGACACTAGA CAAGTTTTAG GTTTAGCTAT TTCAGCCTCA
TTAAACAAAA CAATTGAAGA GACCAAGTTT GGCATCTTCC GTATGTAA
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| Protein sequence | MAKIISKINT RSQDFLDNAA HMQTQVDDLR EKLGEIKLGG GERSRERHIG RGKLLPRDRV
NALLDDGSAF LEFSQLAAYQ VYDDNVPSAG IITGIGRVAG QECVIVANDA TVKGGTYYPL
TVKKHLRAQS IAKENNLPCI YLVDSGGANL PNQDDVFPDK EHFGRIFFNQ ANMSANNIPQ
IAVVMGSCTA GGAYVPAMAD ESIIVKEQGT IFLAGPPLVK AATGEVVSAE DLGGADVHCR
TSGVTDHYAQ NDHHALEIAR SAVKNLNRVK PVTIDFKQVV EPEYPTDDIY GIIPKDTRQP
YDIREVIARI VDGSEFDEFK ALYGNTLVCG FANIYGYPVG IVANNGVLFG ESAEKGAHFI
QLCAQRKIPL VFLQNITGFM VGKQYESGGI AKHGAKMVTA VATAQVPKFT ILIGGSFGAG
NYGMCGRAYD PRFLFMWPNS RISVMGGEQA AGVMAQVTRD KKEKLGESWS EAEEQSFKQP
IIDNYEHQGH PYYASARLWD DGIIDPADTR QVLGLAISAS LNKTIEETKF GIFRM
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