| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1592 |
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| Symbol | |
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| ID | 3522097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1637177 |
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| End bp | 1638094 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637284055 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_268334 |
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| Protein GI | 71281625 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAACAC TAAACGTACT TGATAATAGG TTTTCTCCCT TTAATACCTA TAGTACATTA
AGCACTGATG CACTTGTTGC TGAAACTTTT ACTAATACTA TTTTTGATAA ACGTCAGATC
CTAGCGCTGA TGACGCAGCT ACAAACTACA CTTGATATTG ATGAACTATT AAGTATTTTT
GCGGTAGAAG CTACCAGATA TGTTGATTTT TCTGGGCTGT ACTTTAAAAG TCAGAATTTG
AATACTGTAC TTTTTGGCAG CAGAAAAGCT AAAAAAGAAC AATGTTTTGA ATTAAAGATT
GAAGATAATT TTATTGGTAC ACTCAGCTAT GGTATCAATA GCCCTATCAG CTTAACTAAC
TTTAAAGTGT TAGAACAACT TCACCTATGC CTGTTACACC CGATTAAAAA TGCCATTGCG
TATCATACAG CAATGCAACT TGCTATGCAG GACGGTTTAA CTGGATTAGG TAATCGCCGA
TATTTTGACG AACAATTAAA ACGTTCAATG CATAACGCTA ACCGACATCA TAGCTTGGTT
GGTTTAGTCT TAGGTGACTT AAATAAATTT AAGGCTATAA ATGATACTCA TGGCCACATT
GCTGGAGATA CCGTCTTACA AGAGTTTGCC AATGTACTAC GCTTATGTAC TCGTGACTCA
GATAGCTTAT TTAGATTTGG TGGTGATGAA TTTGCTATAA TCGTCGAAAA TGCTAATGAT
ACCGCTTTAG CTATCATTGA AAACCGAATA AACCTAGCTT TAGCTAGTAA TGTACAATTA
AATAAATACC AACTAGGTTG CAGTATAGGT TCAACGTTTA TGAACAGAGC CGATAATGAA
CTCAGCTTTT TTGAGCGTGC AGACGAAATA CTTTACCGTC GTAAGATGCA AGTATCTTCG
CACTTAAGTG TTGTCTAA
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| Protein sequence | MQTLNVLDNR FSPFNTYSTL STDALVAETF TNTIFDKRQI LALMTQLQTT LDIDELLSIF
AVEATRYVDF SGLYFKSQNL NTVLFGSRKA KKEQCFELKI EDNFIGTLSY GINSPISLTN
FKVLEQLHLC LLHPIKNAIA YHTAMQLAMQ DGLTGLGNRR YFDEQLKRSM HNANRHHSLV
GLVLGDLNKF KAINDTHGHI AGDTVLQEFA NVLRLCTRDS DSLFRFGGDE FAIIVENAND
TALAIIENRI NLALASNVQL NKYQLGCSIG STFMNRADNE LSFFERADEI LYRRKMQVSS
HLSVV
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