| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1583 |
|---|
| Symbol | |
|---|
| ID | 3518422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1628661 |
|---|
| End bp | 1629638 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637284046 |
|---|
| Product | 2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit |
|---|
| Protein accession | YP_268325 |
|---|
| Protein GI | 71277818 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAA TAAATTTATT ACACGCGATT AATAGTGCAC TTGATATTGC CATGGCTGAT
GATAAAAGCA CGGTATGTTT TGGTGAAGAT GTTGGTCATT TTGGTGGCGT ATTTCGTGCC
ACAAGTGGTC TACAAGAAAA ATATGGCAAA GCTCGCTGCT TTAATACTCC TCTAGTAGAG
CAGGGGATTA TTGGTTTTGC TAATGGTCTA GCTGCTCAAG GCAGTGTTGC TATCGCTGAG
ATCCAATTTG CCGATTATAT TTTTCCTGCT TTTGATCAAA TAGTTAATGA AGCGGCTAAA
TTTCGTTACC GCAGCGGCAA TGAATTCAAT GTTGGTAAAT TGACCATTCG TAGCCCATAC
GGTGGTGGTA TTGCGGGGGG CTTGTATCAT AGTCAATCGC CCGAAGCTTA CTTTGCCCAT
ACCCCAGGTT TAAAAGTAGT TATTCCACGT AATCCATATC AAGCTAAAGG TTTATTGCTT
GCGTCTATTC GTGATGATAA TCCGGTGATC TTTTTTGAAC CAAAGCGTTT ATACCGAGCA
TCAGTTGGCG AAGTACCAGA AGAAGATTAT CAATTGCCTT TGGGTAAAGC TGAAGTAGTA
CAAACGGGTA CTGATATCAC TTTACTTGCT TGGGGCGCGC AAATGGAAAT AATTGAAAAA
GCAGCGCAAA TGGCTAGCAA CGATGGTATC TCATGTGAAG TGGTAGACTT ACGTACTATT
TTACCTTGGG ATATAGAAAC TATTAGCAAT TCTGTGATGA AAACAGGTCG TTTGCTTATC
AGTCAAGAAG CACCACTAAC GGCTGGATTT GCCAGTGAAA TAGCCGCCAC TATTCAAAGT
GAGTGTTTTT TACACTTAGA ATCGCCTATT GCTCGTGTAT GTGGTCTAGA TACGCCATAC
CCATTAGCGC TAGAAAAAGA GTATGTTAGC GATCACTTAA AAGTATATGA AGCAATCATA
AAGAGCGTTA ATTTTTAA
|
|---|
| Protein sequence | MAQINLLHAI NSALDIAMAD DKSTVCFGED VGHFGGVFRA TSGLQEKYGK ARCFNTPLVE
QGIIGFANGL AAQGSVAIAE IQFADYIFPA FDQIVNEAAK FRYRSGNEFN VGKLTIRSPY
GGGIAGGLYH SQSPEAYFAH TPGLKVVIPR NPYQAKGLLL ASIRDDNPVI FFEPKRLYRA
SVGEVPEEDY QLPLGKAEVV QTGTDITLLA WGAQMEIIEK AAQMASNDGI SCEVVDLRTI
LPWDIETISN SVMKTGRLLI SQEAPLTAGF ASEIAATIQS ECFLHLESPI ARVCGLDTPY
PLALEKEYVS DHLKVYEAII KSVNF
|
|---|
| |