Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1582 |
Symbol | |
ID | 3521998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1627210 |
End bp | 1628391 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637284045 |
Product | 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit |
Protein accession | YP_268324 |
Protein GI | 71281526 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.919133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAG AAATTTATGA TGATGGACCA GTAGTACATC AACCTACTTT TATCGATGGG ACCAGTGTTG AAATTCCTGA ATTGAGAATT TTAGACCAAG ACGGTGTCAC TTATCCCAAT GCTGACTTAC CCGATATAGA TCAAGCGTTG GCGACCAAAA TTTATCATAG CCTTGCCTTT CATCGTGTAC TAGATGAACG TATGGTGGCT TCACAGCGCC AGGGCCGTTT GAGTTTTTAT ATGACCGCAT TAGGCGAAGA AGCGACGAGT GTTGGTGGTG CTGCGGGACT AAAACCTCAA GATATGATCA TGATGCAATA TCGTGAACAA GGTGCCTTAA TATATCGTGG TTTTGATCTT AAAGATCTAA TGAATCAGCT GTTTAGTAAT GCTGGTGATT TAGGGAAAGG TCGTCAAATG CCGATTCATT ATGGTTCTAA AGCGCTGAAC TGTATGACGG TATCTTCGCC TCTTGCGACA CAAATTCCGC AAGCGACTGG TTATGCTTAT GGGCAAAAAT TGCAAGGTGT TGATGCGGTA ACCATTTGTT ATTTTGGTGA AGGTGCAGCA TCGGAAGGTG ATTTTCATGC AGGTCTAAAT ATGGCTGCAG TACAAGAAGC ACCGGTTATC TTTTTCTGTC GAAACAATGG TTATGCTATC TCTACACCTT CAGATGAACA ATTTAAAGGT AATGGCATTG CTTCTCGTGG TGTCGGTTAC GGCATTAAAA CAATCCGTAT TGATGGAAAT GACATCCTTG CGGTACTTAA AGCAACACAA ATAGCTCGTG CTTACGCAAT AAAAGAAAAT AAACCAGTCT TAATAGAAGC AATGTCTTAT CGTCTGGGCG CACATTCTAC CTCGGATGAT CCATCGGGTT ATCGTACTAA AGAAGAAGAG GCTAAGTGGC AAAGTCATGA TCCTATCTTG CGTATGAAAA ATTGGTTAAT AAACCAAAAG TGGTGGGATG AAGCACGAGA AACTGCATTG TTTGAAAAAT ATCGAGAAGA AGTGTTAGCG GCAGTTAAAG TAGCAGAGAA AATTGATAAA CCACATATAG ATACCATGAT AACTGATGTT TATGATGTGC CATCAGCACA GTTACAAGCA CAATTAGATG AAGTCAAAGC TCACGTTAAT AAATACCCAG AAGCTTACCC ATTTACCGCA GGGAAATTTT AA
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Protein sequence | MSTEIYDDGP VVHQPTFIDG TSVEIPELRI LDQDGVTYPN ADLPDIDQAL ATKIYHSLAF HRVLDERMVA SQRQGRLSFY MTALGEEATS VGGAAGLKPQ DMIMMQYREQ GALIYRGFDL KDLMNQLFSN AGDLGKGRQM PIHYGSKALN CMTVSSPLAT QIPQATGYAY GQKLQGVDAV TICYFGEGAA SEGDFHAGLN MAAVQEAPVI FFCRNNGYAI STPSDEQFKG NGIASRGVGY GIKTIRIDGN DILAVLKATQ IARAYAIKEN KPVLIEAMSY RLGAHSTSDD PSGYRTKEEE AKWQSHDPIL RMKNWLINQK WWDEARETAL FEKYREEVLA AVKVAEKIDK PHIDTMITDV YDVPSAQLQA QLDEVKAHVN KYPEAYPFTA GKF
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