| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1570 |
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| Symbol | dnaE |
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| ID | 3520275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1613253 |
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| End bp | 1616813 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284033 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_268312 |
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| Protein GI | 71279814 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.749203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGCG GAGAAATTGC CACAGAAGCA GAACCAAGCG TTTTTGTACC GCCAAAATTT
ATTCATTTAC GCGTACATAG TGATTACTCT ATGTGTGATG GTTTGAAGAA AGTAAAGCCG
ATAGTTGCGA AAGCTGTTGA GCTTAATATG CCAGCACTTG CCTTAACTGA CCAAACTAAT
TTATGTGGTC TAGTTAAGTA CTATCACGCT GCTCATGGCG CAGGAATTAA ACCAATTATA
GGTTGTGATT TTTGGGTGAA AAGTGATGAG TTGGAAGATG AACTGTCACG TATAGTTGTA
CTTACTACTA ACAATGTAGG TTATAAAAAT ATAACTGAAC TTATCTCAAA AGCCTACATG
CGTGGACACA TACAAAATAA AGCTGTGATA GATAAGTCGT GGCTGGTTGA ATATAAAGAA
GGCTTAATCT TACTTTCTGG TGGCCGAGAA GGTGATATAG GTAAAGCCTT ATTAAAAGGG
AATACTGAAT TAGTTGATGA AATGGTGAGT TTTTATCAGC AACATTTCGA TCGTTGTTAT
TTTCTAGAGT TAGTCAGAAC AGGTCGTAAT GATGAAGAAA ATTATATCCA TCTTGCCGTT
GAGCTAGCCG AAAAAGAAAA TCTGCCAGTA GTTGCAACTA ATGAGGTGAT GTTTCTTTCC
CCAAATGACT TTGATGCCCA TGAAATTCGC GTTGCTATTC ATGACGGCTT TACCTTAGAT
GATAAACGTC GACCTAAGCG TTATAGCTCT GAGCAATATT TACGTAGTGA AGAGGAGATG
TGCGAGCTGT TTAGCGACAT CCCTGAAGCC TTAGCCAATA GTGTCGAAAT TGCTAAACGC
TGTAATGTCA CTGTCACCTT AGGTGAATAC GTCTTACCAG ACTTTCCCAC GGAAGGTTTG
GAGATAAATG ACTTTTTTAT CAAAGTATCT GAAAAAGGGT TAGAAAAACG ACTTGATCAA
TTATTCGACC GTCAAGCGGA TGATTTTGCC GAAATAAGAA AACCTTATGA TGAACGTTTA
GCTATTGAGC TAGAAGTGGT AAATAACATG GGCTTCCCCG GTTATTTCTT GATTGTTATG
GAATTCATTC AATGGAGTAA AGATAACAAT ATCCCCGTTG GCCCCGGTCG TGGTTCTGGT
GCTGGTTCCT TAGTTGCCTA TGCACTAGAT ATTACCGATC TCGATCCACT TGAATATGAT
TTACTTTTTG AGCGCTTCTT AAACCCTGAG CGTGTCTCTA TGCCTGATTT CGATATCGAT
TTCTGTATGG ATAGACGTGA TGAAGTAATC GATCACGTGG CTGAGCTTTA TGGGCGAGAT
GCGGTTTCGC AAATAATTAC TTTTGGTACT ATGGCGGCAA AAGCGGTTAT CCGTGATGTT
GGTCGTGTAC TTGGCCACCC ATACGGTTTT GTCGACAGAA TTTCAAAACT TATACCGCCT
ACCCCTGGCA TGACCTTAGC TAAAGCATTT GAAGAAGAGC CAAAGCTGCC AGAAGTTTAT
GCACAAGATA GTGATGTCAA AGATCTCATT GATATGTGTC GTATCTTAGA AGGTACCACA
CGTAATGCAG GTAAGCATGC GGGTGGTGTT GTTATTTCAC CGACTACTAT TACCGATTTT
GCCCCATTAT ATTGTGATGA TGAAGGTAAA AATCCAGTAA CCCAATTTGA TAAAAATGAT
GTAGAAGATG CTGGCTTAGT TAAGTTCGAT TTCTTAGGTC TACGAACACT GACCATTTTG
CAATGGGCCA TTGAAATGGC TGATGCAAAA TTGATAAAAG CCGGCAAAGA GCCAATCGAT
ATCACCAAAA TTGATCTCGA AGATAAAGCA AGCTTTAAGC TATTACTTGC CTCGAAAACC
ACAGCAGTTT TTCAGCTTGA ATCTAGCGGT ATGAAGTCTT TAATTGATAA ATTAAAACCT
GATTGCTTTG AAGATATTAT CGCATTAGTG GCGTTATTTC GTCCTGGGCC ATTACAATCA
GGCATGGTTG ATAACTTTAT TGAACGTAAA CATGGCCGTG AAGAAGTCAG TTATCCTGAC
GCCACTTGGC AGCATGAAGA TTTACAGCCG GTGCTTGAGC CAACCTACGG CATTATCTTG
TATCAAGAGC AAGTAATGCA AATTGCGCAG GTACTTGCAG GTTACTCACT CGGTGGTGCA
GATATGCTTC GCCGTGCAAT GGGTAAGAAA AAGCCAGAAG AAATGGCTAA GCAGCGCGCC
GGTTTTGAAC AGGGTGCGAA AGATCGTGGT GTTGATGGCG AACTTGCCAT GAAAATTTTC
GATTTGGTTG AAAAATTTGC TGGTTATGGT TTTAACAAAT CGCATTCTGC GGCTTATGCC
TTAGTGTCTT ATCAAACGTT ATGGATGAAG ACACATTTCC CTGCACCGTT TATGGCCGCA
GTAATGTCTG CTGATATGGA CAACACTGAA AAAATTGTCA CTTTAGTTGA TGAGTGTGGC
AATATGGAAA TAGATTTATT GCCACCCGAT GTTAACGCTG GACAATATAA ATTTACCGTT
AATAGTGATA ATCAAATTGT TTATGGTATT GGTGCTGTTA AAGGAGTTGG TGAAGGCCCT
ATTGAAGCTA TTATTAGTGC TCGACAATCA GACGGCCCTT TCACAGACTT ATTTGATTTC
TGTGCACGTC TAGATCTTAA AAAAACTAAT AAACGTGTTT TAGAAAAATT AATTAAATCA
GGTGCTATGG ATAGTCTTGG CCCTAAGTAT GTACAAGGGA AAGCAAAAGA GCAGGGCGCT
AATCGAGCGG CTCTCTTTGA AACATTACCA GAAGCCATTA AAGCAGCAGA GCAACATGCA
AAAGCAGAAT CGTTAGGTCA AAATGACCTT TTTGGTTTAA TAAATGATGA ACAAACTGAT
TCCAGACAAA CTTTTAAAGA AGTCAGAGCT TGGCCTGAGG AAAAGTGGCT AGATGGAGAA
AAAGAAACCT TAGGGCTTTA TTTAACCGGC CATCCCATTA ATCGCTACTT GTCTGAAATA
AAAAAATATT CTTCGAGCCG CCTAGTTGTT ATGCAACCAA CGGGTCGAGA TAGGCAAGCT
GTTGCTGTTG GTTTAGTGAT AGGCGTACGC GTCCTGGTCA ATAAACGCGG GCGTCGCTGG
GCATTAGTGA CGCTAGATGA TAAGAGTGCT CGTATGGATA TTCGTCTTTT TCCAGATGAC
TATGATCGCT TTGCAGAGAT GCTGGTAAAT GACGCTATTT TGGTTTGTAG TGGACAGGTC
AGCTTTGATG ATTATTCTGG TGGTAATACA ATGACAGCTC GGGATATAAT GACTATCACT
GATGCGCGAG AAAATTATCT TAGTTCCATT GATGTTCAAG TTGATAACAG CTTGATAGCA
GATGATTTTA TCGAACAGTT TACTCAGGTA TTAACACCTT TTAAAGAAGG CACCTGTCCA
GTGAGAGTTT TTTATCAGCG CGAAGAAGCC CAAGCTATGC TTGAGTTAGG CGTTCAATGG
CGAGTAACGC CAGCCGATAT GTTACTATAC GAATTAAAAA CATTGCTTGG TGAAGAACGT
GTCGCCATGG AATTTAAATA A
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| Protein sequence | MLSGEIATEA EPSVFVPPKF IHLRVHSDYS MCDGLKKVKP IVAKAVELNM PALALTDQTN
LCGLVKYYHA AHGAGIKPII GCDFWVKSDE LEDELSRIVV LTTNNVGYKN ITELISKAYM
RGHIQNKAVI DKSWLVEYKE GLILLSGGRE GDIGKALLKG NTELVDEMVS FYQQHFDRCY
FLELVRTGRN DEENYIHLAV ELAEKENLPV VATNEVMFLS PNDFDAHEIR VAIHDGFTLD
DKRRPKRYSS EQYLRSEEEM CELFSDIPEA LANSVEIAKR CNVTVTLGEY VLPDFPTEGL
EINDFFIKVS EKGLEKRLDQ LFDRQADDFA EIRKPYDERL AIELEVVNNM GFPGYFLIVM
EFIQWSKDNN IPVGPGRGSG AGSLVAYALD ITDLDPLEYD LLFERFLNPE RVSMPDFDID
FCMDRRDEVI DHVAELYGRD AVSQIITFGT MAAKAVIRDV GRVLGHPYGF VDRISKLIPP
TPGMTLAKAF EEEPKLPEVY AQDSDVKDLI DMCRILEGTT RNAGKHAGGV VISPTTITDF
APLYCDDEGK NPVTQFDKND VEDAGLVKFD FLGLRTLTIL QWAIEMADAK LIKAGKEPID
ITKIDLEDKA SFKLLLASKT TAVFQLESSG MKSLIDKLKP DCFEDIIALV ALFRPGPLQS
GMVDNFIERK HGREEVSYPD ATWQHEDLQP VLEPTYGIIL YQEQVMQIAQ VLAGYSLGGA
DMLRRAMGKK KPEEMAKQRA GFEQGAKDRG VDGELAMKIF DLVEKFAGYG FNKSHSAAYA
LVSYQTLWMK THFPAPFMAA VMSADMDNTE KIVTLVDECG NMEIDLLPPD VNAGQYKFTV
NSDNQIVYGI GAVKGVGEGP IEAIISARQS DGPFTDLFDF CARLDLKKTN KRVLEKLIKS
GAMDSLGPKY VQGKAKEQGA NRAALFETLP EAIKAAEQHA KAESLGQNDL FGLINDEQTD
SRQTFKEVRA WPEEKWLDGE KETLGLYLTG HPINRYLSEI KKYSSSRLVV MQPTGRDRQA
VAVGLVIGVR VLVNKRGRRW ALVTLDDKSA RMDIRLFPDD YDRFAEMLVN DAILVCSGQV
SFDDYSGGNT MTARDIMTIT DARENYLSSI DVQVDNSLIA DDFIEQFTQV LTPFKEGTCP
VRVFYQREEA QAMLELGVQW RVTPADMLLY ELKTLLGEER VAMEFK
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