Gene CPS_1569 details

Gene Information

• Locus tag: CPS_1569
• Symbol: rnhB
• ID: 3519319
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1612598
• End bp: 1613251
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637284032
• Product: ribonuclease HII
• Protein accession: YP_268311
• Protein GI: 71279195
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAGTA AGCAAATTTT CCCTGATTTT GAATACCCTA TCGCGTATTG CATTGCGGGT 
GTTGATGAAG TCGGTCGTGG TCCTTTAGTT GGTGATGTGG TTACAGCGGC GGTAATTTTA 
GATCCCGATA ACCCGATTGA AGGATTGATG GACTCGAAAA AATTATCAGA AAAGAAGCGT 
AACTTGTTAT CCCTTGAAAT AAAGGAAAAG GCAATCTCTT GGTCATTAGG GCGTGCTTCT 
CCACAAGAAA TTGATACCTT GAATATATTA CACGCCACTA TGCTTGCGAT GCAGCGAGCT 
GTTGAAGGAC TGAATGTTGA ACCTGACTTT GTGCTTGTTG ATGGTAATCG TTGTCCTACA 
TTCTTATGCA ATGCCAGTGA AAGTAACCAA CAAAATTTAA AAATTGCTAG CCAAGCGGTA 
GTGAAAGGTG ACGCTAGAGT TACTGAAATA AGTGCTGCGT CTATTATTGC TAAAGTAGCT 
CGCGATAATG AAATGATAGC CTTAGACAAA CTCCATCCTG AATATGGTTT CGCCAAGCAC 
AAAGGTTACC CAACTAAACT TCATTTAGAA AAAATTATCG AGCATGGCGT ACTGGATTGT 
TATCGACAAA GCTTTAAGCC TGTCGCTAGA GTATTAGGTA CATACCATGA CTGA 

 

Protein sequence

MASKQIFPDF EYPIAYCIAG VDEVGRGPLV GDVVTAAVIL DPDNPIEGLM DSKKLSEKKR 
NLLSLEIKEK AISWSLGRAS PQEIDTLNIL HATMLAMQRA VEGLNVEPDF VLVDGNRCPT 
FLCNASESNQ QNLKIASQAV VKGDARVTEI SAASIIAKVA RDNEMIALDK LHPEYGFAKH 
KGYPTKLHLE KIIEHGVLDC YRQSFKPVAR VLGTYHD