| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1565 |
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| Symbol | lpxA |
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| ID | 3520307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1610258 |
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| End bp | 1611028 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637284028 |
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| Product | UDP-N-acetylglucosamine acyltransferase |
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| Protein accession | YP_268307 |
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| Protein GI | 71279846 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
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| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0795983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCATC CCCAAGCTAT TATTGAACCA GGTGCCGTTA TTGGCAAAAA TGTGTCTATA
GGTCCATGGA CTTATATTGC CAGTAATGTT GTGATTGGCG ATAACTGTGA AATCAGCTCG
CATGTGGTCA TTAATGGCCC AAGCCGTATC GGTAAAGGTA ACCGTATATT TCAATTTGCA
AGTATTGGTG AAGACTGTCA GGACATTAAA TATGACGGTG AGCCAACTGA ATTGATCATT
GGTGATAACA ATACCTTTCG AGAATCTTGT ACTGTTCATC GTGGCACGAT TCAAGATAAT
AGTATTACTC AAATTGGCAG TAATAATTTA TTTATGGCCT ATACCCATGT GGCCCACGAT
TGTATTGTTG GAAGTCATTG CATTTTCGCA AATAATGCTT CTATTGCTGG TCACGTCCAT
GTAGGTGACC ACGCTATTAT TGGTGGTATG GTAGGTGTTC ATCAATTCTG CCATATTGGC
GCACATAGTT TTATTGCTGG TAATGCCCTA ATACTTAAAG ATGTTCCTGC TTATGTTATG
GCTTCAGGTC AACCGGCTAA ACCTTTTGGC TTAAACAGTG AAGGTTTAAA ACGTCGTGGT
TTTGATAAAG AAACCATTCT AACGATAAAA CGTGCTTACA AGGTGTTGTA CCGACAAGGG
CTTTCTGTTG AAGACGCATT AAGCGCTATC AATGAAATGC CAGCCCAATC TCCAGAATTA
CAAGCGTTTT GTAATTCAAT CAAAGAATCT AATCGCGGTA TCATTCGTTA A
|
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| Protein sequence | MIHPQAIIEP GAVIGKNVSI GPWTYIASNV VIGDNCEISS HVVINGPSRI GKGNRIFQFA
SIGEDCQDIK YDGEPTELII GDNNTFRESC TVHRGTIQDN SITQIGSNNL FMAYTHVAHD
CIVGSHCIFA NNASIAGHVH VGDHAIIGGM VGVHQFCHIG AHSFIAGNAL ILKDVPAYVM
ASGQPAKPFG LNSEGLKRRG FDKETILTIK RAYKVLYRQG LSVEDALSAI NEMPAQSPEL
QAFCNSIKES NRGIIR
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