| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1563 |
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| Symbol | lpxD |
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| ID | 3523357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1608564 |
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| End bp | 1609613 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637284026 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_268305 |
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| Protein GI | 71278708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.153093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTACA CGTTAGCTGA AATTGCTATC AAACTAGATG CTAAATTGAT AGTACCAGCT
GCGCTAGATG AGCAAAACGA AGCACTGACT CAAATCAGTG GCTTAGCAAC TTTAGCAAAG
GCGGGGACAG GGCAAGTGGC TTTTCTTGCC AATAGCAAGT ATCAGCAACA ACTTAGCTCA
ACTAATGCGA GTGCGGTGAT TGTCTCTCCT GATGCCGTAG AGGCCTGTCA GGTCAGTGCT
CTTGTCATGG ATAACCCTTA TATGGGGTAT GCCATGCTAG CTAGTTTACT TGATAGTACG
CCAAAAGTGT CTTGTGGGAT TCATCCCAAT GCTGTTATTG CCGATGATGT TTTAATCGGT
GAAAATGTAA GTGTTGGCGC TAATACAGTT ATTGAGTCAG GTGTGCAACT AGCTGATAAT
GTAAGTATTG GTGCCGGTTG CTTTATTGGT CATGGGGCTA AAATTGGTGA ATCAACGATA
CTCTGGGCAA ATATTACTAT TTATCACAGA GTAGAGATTG GTCATCATTG CTTAATTCAA
GCTAGCACTG TTATTGGCTC CGACGGTTTT GGTTATGCGC CGGTAAAAGG GCAGTATAAA
TGGCATAAAA TCCCGCAATT AGGCAGCGTC ATTATTGGCG ACCATGTTGA GATTGGCGCT
AGTACTACTA TTGACCGAGG GGCACTGGAT AATACCGAAA TAAGAGACGG TGTAATTTTA
GATAACCAAA TTCAAATTGC TCACAATGTT ATTGTTGGCG AGAATACCGC CATAGCAGGT
TGTACCGTCA TTGCAGGTAG CACTGTCATA GGTAAGAATT GTACTATTGC CGGTCTGGTC
GGAGTTAATG GTCATATTAC TATTGCTGAT AATTGTGTTT TTACTGGCAT GTCCATGGTA
ACCAAGAATA TCAGTCAAGC AGGAGTGTAT TCTTCTGGTA TGCCAGTAGT ACAAAATAAA
GAATGGAATA AAACTAATGC CAGAGTTAAG CGACTTGATA GCTTGACTAA ACGAGTGAAA
GAGTTAGAAA AATTACTCGC TAAAAACTAG
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| Protein sequence | MTYTLAEIAI KLDAKLIVPA ALDEQNEALT QISGLATLAK AGTGQVAFLA NSKYQQQLSS
TNASAVIVSP DAVEACQVSA LVMDNPYMGY AMLASLLDST PKVSCGIHPN AVIADDVLIG
ENVSVGANTV IESGVQLADN VSIGAGCFIG HGAKIGESTI LWANITIYHR VEIGHHCLIQ
ASTVIGSDGF GYAPVKGQYK WHKIPQLGSV IIGDHVEIGA STTIDRGALD NTEIRDGVIL
DNQIQIAHNV IVGENTAIAG CTVIAGSTVI GKNCTIAGLV GVNGHITIAD NCVFTGMSMV
TKNISQAGVY SSGMPVVQNK EWNKTNARVK RLDSLTKRVK ELEKLLAKN
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