Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1557 |
Symbol | uppS |
ID | 3519873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1600727 |
End bp | 1601491 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637284020 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_268299 |
Protein GI | 71279416 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.243823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAATA CCGACATATT GGTTGAACAA ACTGATAATA AAAGCATCCC TCAACATGTT GCTATCATCA TGGATGGTAA TGGCCGCTGG GCGCAACTGC AAGGCAAGGG ACGAGTTGCA GGACACAAGG CTGGCGTTGA ATCAGTACGA CAGGTTGTTG CTACGGCCCG AAAGTCTAAT GTTAAAGCGT TAACACTCTT TGCTTTTAGT AGTGAAAATT GGCAGCGACC GGCAAAAGAA GTCAGTGTAC TGATGGATTT ATTTATGTAT GTGCTAACTA AAGAAGTTAA GCGTTTACAT AAACATAATA TTCGCTTTCA AGTGGTTGGT GATTTAAGCC GTTTTTCTGA TAAATTACAA AAAAACATTG CTAAATCAGA GCAGCTTACT GCAGATAATA CTGGATTAGT ATTATCCATA GCGGCAAATT ATGGTGGTCG TTGGGATATC GCTCAAGCGG CTAAAAAATT AGCTAGTGAC GTCAAACAAG GTACTATGTC CCTTGATGAT ATTAATGAAG AAACACTCAA TGAACATACC TGTTTAGCAA ACCTACCTAC ATTAGATCTA CTTATCCGTA CCGGTGGTGA TTATCGCATT AGTAATTTTC TCTTGTGGCA AGCTGCTTAT GCAGAGCTTT ATTTTACCGA TACGCTGTGG CCTGACTTTA ATGAAGTACA ATTTTTAGAA GCCATGAGCT GCTTTGATCA CCGAGAACGT CGTTTTGGCA AAACAGGCGA ACAAGCAAGA AACGAAAAAA TATAG
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Protein sequence | MDNTDILVEQ TDNKSIPQHV AIIMDGNGRW AQLQGKGRVA GHKAGVESVR QVVATARKSN VKALTLFAFS SENWQRPAKE VSVLMDLFMY VLTKEVKRLH KHNIRFQVVG DLSRFSDKLQ KNIAKSEQLT ADNTGLVLSI AANYGGRWDI AQAAKKLASD VKQGTMSLDD INEETLNEHT CLANLPTLDL LIRTGGDYRI SNFLLWQAAY AELYFTDTLW PDFNEVQFLE AMSCFDHRER RFGKTGEQAR NEKI
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