Gene CPS_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1557 
SymboluppS 
ID3519873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1600727 
End bp1601491 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content40% 
IMG OID637284020 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_268299 
Protein GI71279416 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.243823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAATA CCGACATATT GGTTGAACAA ACTGATAATA AAAGCATCCC TCAACATGTT 
GCTATCATCA TGGATGGTAA TGGCCGCTGG GCGCAACTGC AAGGCAAGGG ACGAGTTGCA
GGACACAAGG CTGGCGTTGA ATCAGTACGA CAGGTTGTTG CTACGGCCCG AAAGTCTAAT
GTTAAAGCGT TAACACTCTT TGCTTTTAGT AGTGAAAATT GGCAGCGACC GGCAAAAGAA
GTCAGTGTAC TGATGGATTT ATTTATGTAT GTGCTAACTA AAGAAGTTAA GCGTTTACAT
AAACATAATA TTCGCTTTCA AGTGGTTGGT GATTTAAGCC GTTTTTCTGA TAAATTACAA
AAAAACATTG CTAAATCAGA GCAGCTTACT GCAGATAATA CTGGATTAGT ATTATCCATA
GCGGCAAATT ATGGTGGTCG TTGGGATATC GCTCAAGCGG CTAAAAAATT AGCTAGTGAC
GTCAAACAAG GTACTATGTC CCTTGATGAT ATTAATGAAG AAACACTCAA TGAACATACC
TGTTTAGCAA ACCTACCTAC ATTAGATCTA CTTATCCGTA CCGGTGGTGA TTATCGCATT
AGTAATTTTC TCTTGTGGCA AGCTGCTTAT GCAGAGCTTT ATTTTACCGA TACGCTGTGG
CCTGACTTTA ATGAAGTACA ATTTTTAGAA GCCATGAGCT GCTTTGATCA CCGAGAACGT
CGTTTTGGCA AAACAGGCGA ACAAGCAAGA AACGAAAAAA TATAG
 
Protein sequence
MDNTDILVEQ TDNKSIPQHV AIIMDGNGRW AQLQGKGRVA GHKAGVESVR QVVATARKSN 
VKALTLFAFS SENWQRPAKE VSVLMDLFMY VLTKEVKRLH KHNIRFQVVG DLSRFSDKLQ
KNIAKSEQLT ADNTGLVLSI AANYGGRWDI AQAAKKLASD VKQGTMSLDD INEETLNEHT
CLANLPTLDL LIRTGGDYRI SNFLLWQAAY AELYFTDTLW PDFNEVQFLE AMSCFDHRER
RFGKTGEQAR NEKI