Gene CPS_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1545 
SymbolrpiA 
ID3518555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp1589082 
End bp1589738 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content41% 
IMG OID637284008 
Productribose-5-phosphate isomerase A 
Protein accessionYP_268287 
Protein GI71278882 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG ATGAAATGAA AAACGCAGCC GCCATTAAGG CATTAGAATT CATTGAAAAT 
GATACTATCG TCGGTGTTGG CACTGGCTCA ACAGTTAACT TTTTCATTGA AGCTCTAGCC 
TCGATGAAAG ATAAAATAGC AGGTGCTGTT TCTAGCTCAG AAGAGTCAAC TAAGCGTTTA 
AAAGCACACG GTATTGAGGT ATTTGATTTA AACAGTGTTG ATGTTTTAGA TGTATACGTT 
GACGGTGCCG ATGAAATCAC TCGTCATATG TCGATGATCA AAGGCGGTGG CGCAGCATTA 
ACCCGTGAAA AAATCGTGGC GGCAGTCGCC AAGAAATTTA TTTGCATTGC CGACGATTCC 
AAACAAGTAA AAGTATTGGG TAACTTTCCT TTGCCTGTTG AAGTAATACC TATGGCGCGG 
AGTTATGTCG CACGTGAATT AGTTAAATTA GGTGGCGACC CAGTTTACCG TCAAGGTGTG 
ACCACAGATA ATGGCAACGT TATCCTTGAT GTGTACAATC TCGAAATTCT TGATCCAAAA 
GCACTAGAAA CTCAAATTAA CGCTATTGTT GGCGTTGTGA CTAATGGTTT GTTTGCACTT 
CGTGGCGCTG ACATATTAGT ACTTGGTAGC AAAGATGGAA TTCAGGTTAT CCAATAA
 
Protein sequence
MTQDEMKNAA AIKALEFIEN DTIVGVGTGS TVNFFIEALA SMKDKIAGAV SSSEESTKRL 
KAHGIEVFDL NSVDVLDVYV DGADEITRHM SMIKGGGAAL TREKIVAAVA KKFICIADDS 
KQVKVLGNFP LPVEVIPMAR SYVARELVKL GGDPVYRQGV TTDNGNVILD VYNLEILDPK 
ALETQINAIV GVVTNGLFAL RGADILVLGS KDGIQVIQ