| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1532 |
|---|
| Symbol | nusB |
|---|
| ID | 3519785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1573818 |
|---|
| End bp | 1574234 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637283995 |
|---|
| Product | transcription termination/antitermination factor NusB |
|---|
| Protein accession | YP_268274 |
|---|
| Protein GI | 71279330 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.318402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCTT CTCCTAGAAG AAAAGCCCGT GAACTAGCTG TACAAGCTGT ATATTCATGG
CAAGTTAGTA AAAATCCTGT AAATGATATT GAAGTTAACT TTATCGCAGA CAACAGTAAA
CGTCGTTTTG ATATTGAATA TTTTCAATTA TTATTGCGTG GCGTAACCAC CAATATTGGT
TCAATAGATG AGGCTATCAT TCCTTATGTA GACCGTCCCC TTGATGATAT TGACCAAGTG
GAAAAGGCTA TCTTACGCGT GGCAGTATTT GAATTAAAAG ACTGTACCGA TGTACCTTAT
CGCGTAGTGA TTAATGAAGC TATAGAGTTA GCTAAATCAT TTGCAGCGGA TGATAGTCAT
AAGTTTGTTA ACGGTGTTTT AGATAAAACC GTTAAATTAA TTCGCCCTCA AGAATAA
|
|---|
| Protein sequence | MKPSPRRKAR ELAVQAVYSW QVSKNPVNDI EVNFIADNSK RRFDIEYFQL LLRGVTTNIG
SIDEAIIPYV DRPLDDIDQV EKAILRVAVF ELKDCTDVPY RVVINEAIEL AKSFAADDSH
KFVNGVLDKT VKLIRPQE
|
|---|
| |