Gene CPS_1531 details

Gene Information

• Locus tag: CPS_1531
• Symbol: ribH
• ID: 3519446
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1573322
• End bp: 1573786
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637283994
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_268273
• Protein GI: 71279049
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.556291
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTA TTGAAGGTTC GTTTGAAGCA AAAGGCAAGA AATTTGCTAT CGTTGTATCG 
CGTTTTAATC ACTTTATAGT TGATAGTTTA TTAGACGGCG CTGTTGATGC CCTTAAACGT 
CATGGTAATG TTAATGACGA AGATATTACT ATCGTTCGAG TACCTGGTGC ATATGAGTTA 
CCTCTAGCAG CTAAAAAAAT TGCTAAAAAA GGCGAGGCGG ATGCAATTAT TGCCATCGGT 
GCTGTTATTC GTGGTGGCAC TCCGCACTTT GATTTTGTTG CGGGTGAATC TAATAAAGGT 
TTAGCACAAG TTTGTTTAGA ATCTGAGATT CCAGTTTCAT TTGGTGTGAT TACAACCGAC 
TCTATTGAAC AAGCCATTGA ACGTGCAGGT ACTAAAGCTG GCAATAAGGG TGCTGAAGCT 
GCTCTTGGTG CATTAGAAAT GGTTAATGTA TTAGCTCAAA TTTAA 

 

Protein sequence

MNIIEGSFEA KGKKFAIVVS RFNHFIVDSL LDGAVDALKR HGNVNDEDIT IVRVPGAYEL 
PLAAKKIAKK GEADAIIAIG AVIRGGTPHF DFVAGESNKG LAQVCLESEI PVSFGVITTD 
SIEQAIERAG TKAGNKGAEA ALGALEMVNV LAQI