Gene CPS_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1527 
Symbol 
ID3519060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1570421 
End bp1571137 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content35% 
IMG OID637283990 
ProductcheW-like domain-containing protein 
Protein accessionYP_268269 
Protein GI71278336 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.54686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT ATTTATCTGA ACTACTAACT GAGCCTGAGG TTGTTGAAAG CTTATCGCAA 
CCAAGTATTG CTGAACAAGC AATCAGTAGA CCATTAGCGC ATAAAGAAAA TCAGTCTTTA
GAAAACTTAT TAAAAACAGT AAATGAACCG AAAGAAAATA CGGTCAAAAA AGAAGTAAAT
GTTAGTTCTG TTTCAAAGAC TGATTTGTTA CCGATTGAGA CAGATAAAAA CAGTGCAGAA
AAGCATAGTT CACCACCGAA AAGTTATCGA CAAGGTGACT TTCAAGCAAT GTTTTTTAAA
GTAGCAGGTT TAACCATTGC AGTTCCCTTA ATCGAATTAG GTGGAATTCA TAAAGTTGAC
AAAACAACTA GTTTAATGGG GAAACCTGAC TGGTTTAAAG GAGTGATGCT GTATCGTGAT
GAAAAAATTA ATGTTGTGGA TACCGCATTA TGGGTTATGC CAGAAAAATG TGATCAAGCA
TTAAAAGACT CACTAAATTA TCAATATATT ATCATGCTTA ATGATAGCTC TTGGGGACTG
ATGGCTGAAC ATTTAGTTGA TACAGTCGTA TTGTCTCAAG ATGAAGTTAA ATGGCTAGAT
TCTAGCGATA AACGCCCATG GTTAGCGGGC TTAGTCAAAG AAAAAATGTG TGCCTTACTT
GATGTAAGTG CTTTGATTGA ATTGCTTGAT AAAGGCAGTG ATATCTATCA AGAATAG
 
Protein sequence
MKNYLSELLT EPEVVESLSQ PSIAEQAISR PLAHKENQSL ENLLKTVNEP KENTVKKEVN 
VSSVSKTDLL PIETDKNSAE KHSSPPKSYR QGDFQAMFFK VAGLTIAVPL IELGGIHKVD
KTTSLMGKPD WFKGVMLYRD EKINVVDTAL WVMPEKCDQA LKDSLNYQYI IMLNDSSWGL
MAEHLVDTVV LSQDEVKWLD SSDKRPWLAG LVKEKMCALL DVSALIELLD KGSDIYQE