Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1486 |
Symbol | |
ID | 3522955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1526377 |
End bp | 1528374 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283949 |
Product | flagellar hook-associated protein |
Protein accession | YP_268228 |
Protein GI | 71282480 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.986864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTGA GTTTGTACCA ATCAGGTATG AGTGGCTTAT TAGCTGCTCA ACAGCAGCTG GCGACAACCG GTCATAATAT TTCCAACGTT AATACGGATG GCTATAACCG CCAGCGTGCA GAACAGAATG CAACGGTAGG TCTAAATAAT GGTAATAACT ACATTGGCGG TGGTACTTAT ATTCAAGACA TTACGCGTCT TTACGATCAG TTTTCACATA AAGAACAAAT AACGAATCAA AGTAAATTAG GTAATGCTGA CTCACTTCAT GCACGCTTAA CACAACTTGA CCAAGTTATG TCTACTTCCG GTAATGCTGT TGTTGGCTCG TTAGATCAAT TCTACCAAGC GCTAAACGGT GTTGCAGACA ACCCTAATGA TTCAGGTCTT CGTAGTATCG TACTTAATCA AGCCAATACT CTAAGTAATG ACTTTAACCA GTTAACTAAC AACCTTGATC AAATGACTAA ATCCATCAAC GGTGAAATAG AGCAAGTCGC CAGTAAAATT TCAGAAATAT CACAAGAACT CGCCAAAATT AACGAAACGA TAATGCATTC GCAGCAAGGA GGCCAGCCTA ATGACCTACT TGATAAACGT GATCAGCTTA TTGGCGAGTT GAGTAATTAT ACCCAGGTAA ACACAGTAAA AGATGCTAAT AATGTAATGA CGGTTATGAT TGGGCAAGGT ACTACGCTCG TTGCCGGTAT AACACCAATG ACACTGCAAG TAAATGCTGG CGACCCTGAT TCACAACAAA CAGAATTAAG ATTAGTTAGC GGTAGCAGCA GTGTTGCACT AAAGGGATCT ACCCTAGGTG GTTCATTAGC GGCAAGCTTT GAATTTAGAG ATGAACATTT AAGCCAAACG CGTACTGAAA TAGACCGTCT AGCCATGGCA ATATCTTCTA CGTTGAATGA CAGTCAAGCT AGTGGTTTAG ATTTGAATGG TTTGCAAGGT GTCAATATCT TTACTGATAT TAACAGCACG CAATTACAGC AAGGCAGGGT ATTAGCGCAT TCAGGTAATA GCGGTAGTAC ACAAGCAGAA ATTACCATTA CCGATGTATC TAAACTAACT ACAGATGAAT TTGAAATCCG TTTTGAAGGG GGGAATTTTA CCCTATATAA CTTAACGTCT GGGAGCAGCG AAAATTTAGG GCCTCCTATT TTACCAAGTG GTGGTACGCA TAAGCCATCT TCTCCAGATT ATGGTTTCTC ATTTGTTGAA ACAGGTACGC CTGCTGCTGG TGATAAGTTC ACTATTATAC CAACCAAAAA CAGCGCCGCC TTAATGCAAA CCACGTTAAC TGATGGCAAT GCCATTGCCG CAAGTACCGC GATAGGTGTT ACACCATCAA CAAACAATGT AAGCGATGGC AAGATTGAAA TTATCAATGT CATGAACCCC GAAGACGCCA AATCTTTTAC CGGAACGGGC CTTACTGTGG ATGTTGTTGA AAGCGCTCCA GGCTCGGGAA TATTTGATTA TCGTGTCTTT GATACAGCTA CACCCCCTGC ACTAATCACT TCTGGCAATT ATAATGCTGG AGATAGTGAA GTTGTTGATT TACCACCGTT ACCTGGTACA CCTGCTTTTC AAATTGAAAT CTCAGGGAAC CTAGTAGGCT CTGGAACTAA TGCCAGAGAA GAATTCAGTA TTAATGATGC TTTTGGTGTT GGTAATGGTA AACATGCGGT TGCTATGGCA AAAACACAAG AAGTTGGCGT AACCAATGGC GGTAAAGAAA CCTTTAGCAA AAGCCTTGCT GTATCAACAT CCGTTGTTGG CGCTAAAGCA AGTAATGCAG AATTAACTGC AGACACAGCA CAAGCCTTAT TTACTCAAGC TTATAATCGC AATCAATCTA CATCAGGTGT AAACCTTGAT GAAGAAGCGG CAAATTTATT AAAGTTTCAA CAAGCTTATC AAGCCGCCTC ACAAATTATT TCTACGGCGA ATACCATTTT TGACACTATT TTAGCTGCGG TAAGGTAA
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Protein sequence | MSVSLYQSGM SGLLAAQQQL ATTGHNISNV NTDGYNRQRA EQNATVGLNN GNNYIGGGTY IQDITRLYDQ FSHKEQITNQ SKLGNADSLH ARLTQLDQVM STSGNAVVGS LDQFYQALNG VADNPNDSGL RSIVLNQANT LSNDFNQLTN NLDQMTKSIN GEIEQVASKI SEISQELAKI NETIMHSQQG GQPNDLLDKR DQLIGELSNY TQVNTVKDAN NVMTVMIGQG TTLVAGITPM TLQVNAGDPD SQQTELRLVS GSSSVALKGS TLGGSLAASF EFRDEHLSQT RTEIDRLAMA ISSTLNDSQA SGLDLNGLQG VNIFTDINST QLQQGRVLAH SGNSGSTQAE ITITDVSKLT TDEFEIRFEG GNFTLYNLTS GSSENLGPPI LPSGGTHKPS SPDYGFSFVE TGTPAAGDKF TIIPTKNSAA LMQTTLTDGN AIAASTAIGV TPSTNNVSDG KIEIINVMNP EDAKSFTGTG LTVDVVESAP GSGIFDYRVF DTATPPALIT SGNYNAGDSE VVDLPPLPGT PAFQIEISGN LVGSGTNARE EFSINDAFGV GNGKHAVAMA KTQEVGVTNG GKETFSKSLA VSTSVVGAKA SNAELTADTA QALFTQAYNR NQSTSGVNLD EEAANLLKFQ QAYQAASQII STANTIFDTI LAAVR
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