Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1481 |
Symbol | flgF |
ID | 3522387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1521080 |
End bp | 1521823 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637283944 |
Product | flagellar basal-body rod protein FlgF |
Protein accession | YP_268223 |
Protein GI | 71281915 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGT TGCTTTATAT CGCCATGAGT GGCGCTAAAC AAAATATGCA AGCCTTATCA ATCAATGCCA ACAACTTGGC GAATGCTAAA ACGACAGGCT TTAAAGCTGA TTTAGCACAA GCGCGAAGTA TGCAAGCATT TGGCGAAGGA TTACCTTCGC GTGTTTTTTC AATGACAGAA CGTGCTAGCC AAAATTTTGA CTCTGGATCT ATTCTCCATA CTGGTCGCTC TTTAGATATG GCTATTGAAG GCGAAGGTTT TTTTGCCGTA CAAGCCGAAG ATGGGCAAGA AGCTTATACT CGTGGCGGTC ACTTTCGTTT AACAGAAACG GGTGCATTAG AAACCAATGA TGGCGAATTA GTGATTGGTG AGAATGGACC AATCACCCTG CCGTTACCGA TTAACAATAT TCAAATCTCT CGCGATGGCA CTATCATGGT TCAGCCAGCA GGTGCACCTA GCAGTGTTCA AGAAGAAGTT GGTCGTATTA AACTGGTTAA CCCAGACACT CGACTTGTTG ATAAAGGTAA TGATGGTCTT TTTCGTGCCA AAAATGGTGG CCAATTAATT GCAGATGTTA ATGTCAATGT TCTTGGTGGC GCACTCGAGT CGAGTAATGT TAACCCTATT AATGAAATGA CAGACATGAT TGCCTTACAG CGTCAGTTTG AAATGCAACT AAAAATGATG AAAACAGCAG AAGAAATTGA TTCAAGTGCT TCTTCATTAT TACGTGCTTT CTAA
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Protein sequence | MDKLLYIAMS GAKQNMQALS INANNLANAK TTGFKADLAQ ARSMQAFGEG LPSRVFSMTE RASQNFDSGS ILHTGRSLDM AIEGEGFFAV QAEDGQEAYT RGGHFRLTET GALETNDGEL VIGENGPITL PLPINNIQIS RDGTIMVQPA GAPSSVQEEV GRIKLVNPDT RLVDKGNDGL FRAKNGGQLI ADVNVNVLGG ALESSNVNPI NEMTDMIALQ RQFEMQLKMM KTAEEIDSSA SSLLRAF
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