Gene CPS_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1481 
SymbolflgF 
ID3522387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1521080 
End bp1521823 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content41% 
IMG OID637283944 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_268223 
Protein GI71281915 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGT TGCTTTATAT CGCCATGAGT GGCGCTAAAC AAAATATGCA AGCCTTATCA 
ATCAATGCCA ACAACTTGGC GAATGCTAAA ACGACAGGCT TTAAAGCTGA TTTAGCACAA
GCGCGAAGTA TGCAAGCATT TGGCGAAGGA TTACCTTCGC GTGTTTTTTC AATGACAGAA
CGTGCTAGCC AAAATTTTGA CTCTGGATCT ATTCTCCATA CTGGTCGCTC TTTAGATATG
GCTATTGAAG GCGAAGGTTT TTTTGCCGTA CAAGCCGAAG ATGGGCAAGA AGCTTATACT
CGTGGCGGTC ACTTTCGTTT AACAGAAACG GGTGCATTAG AAACCAATGA TGGCGAATTA
GTGATTGGTG AGAATGGACC AATCACCCTG CCGTTACCGA TTAACAATAT TCAAATCTCT
CGCGATGGCA CTATCATGGT TCAGCCAGCA GGTGCACCTA GCAGTGTTCA AGAAGAAGTT
GGTCGTATTA AACTGGTTAA CCCAGACACT CGACTTGTTG ATAAAGGTAA TGATGGTCTT
TTTCGTGCCA AAAATGGTGG CCAATTAATT GCAGATGTTA ATGTCAATGT TCTTGGTGGC
GCACTCGAGT CGAGTAATGT TAACCCTATT AATGAAATGA CAGACATGAT TGCCTTACAG
CGTCAGTTTG AAATGCAACT AAAAATGATG AAAACAGCAG AAGAAATTGA TTCAAGTGCT
TCTTCATTAT TACGTGCTTT CTAA
 
Protein sequence
MDKLLYIAMS GAKQNMQALS INANNLANAK TTGFKADLAQ ARSMQAFGEG LPSRVFSMTE 
RASQNFDSGS ILHTGRSLDM AIEGEGFFAV QAEDGQEAYT RGGHFRLTET GALETNDGEL
VIGENGPITL PLPINNIQIS RDGTIMVQPA GAPSSVQEEV GRIKLVNPDT RLVDKGNDGL
FRAKNGGQLI ADVNVNVLGG ALESSNVNPI NEMTDMIALQ RQFEMQLKMM KTAEEIDSSA
SSLLRAF