Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1443 |
Symbol | |
ID | 3522152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 1483490 |
End bp | 1484524 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637283907 |
Product | hypothetical protein |
Protein accession | YP_268186 |
Protein GI | 71281680 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.361496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCTTTG CTATGCAGGT AGAAATAAAA AGGCTATTAC GTTTTACGTT GCTGTTACCA CTTTTGACTT TCTTTTGCAG CCAAGTACTC GCCGATGACA TGAGGCCGGC CTCACTAACA ATTACCGCAA CTAGTGACAC AGATTTTGAC GTGGTTTGGA AAGTACCACT TCGCAATGGT AAAAAAGAAA AAATTAGCTT TGTATTACCT AAGAATAGTC AGCAGTTAGG TTTAACAAGA AAACATGTCG TTAATAATGC TTATATCGAA TATAGCCGAT TTCATCGAGC AACGGGGTTA TCAGGAATGA TGCTCAGCAT TGACGGCATT GAAAGATCAA AGGGCGATAT ACTCGTTCGA ATAATAGCAG TGAATAAAGA CACCCTAACA ACCATACTCA ATGTAGATAC TCCTGAATAC TTGATAAAAA AAGTGGTCTC ACTAAGTACC TTTGACACTG CGATTACCTA TATAGAAATT GGTATAGAAC ACATTCTCAT TGGTTTAGAC CACTTATTAT TTGTTGCTTG TTTGGTGTAT ATCTCAGGTA CGCGAAAAAA ACTACTCTAT ACCATTACAG GTTTTACCAT AGCTCATTCA ATCACACTAT TTTTGTCAGC AACAAATGTC ATGGTTATCC CAATTGAGCC AGTAGAAGCG GTTATCGCAT TAAGTATTAT TTTTTTAGCC TGGGAGATAG CCAAAAACAA ACAGCACAGT TTAAGCTTAC GCTATCCGGT CTTGGTCTCA TCGAGTTTTG GCTTACTTCA TGGATTTGGT TTTGCGGCAG TACTGAGTGA TATAGGGCTA CCCGAAACGG AAAAATCATT AGCATTATTG AGTTTTAATA TCGGCGTAGA ATTAGGTCAG TTAATTTTTG TTTTGGCACT ATTTTTATTG GTTAAGTTCG CATCAGTACT TTATAAATGG CTACAACATA AGCCATTAAC CTTACCCATG CTGCGTTTAC CAATTAGTTA CCTTTGCGGT ATCACAGCAA CCTTTTGGCT AATTGAACGA TTAGCGGCCT TTTAA
|
Protein sequence | MIFAMQVEIK RLLRFTLLLP LLTFFCSQVL ADDMRPASLT ITATSDTDFD VVWKVPLRNG KKEKISFVLP KNSQQLGLTR KHVVNNAYIE YSRFHRATGL SGMMLSIDGI ERSKGDILVR IIAVNKDTLT TILNVDTPEY LIKKVVSLST FDTAITYIEI GIEHILIGLD HLLFVACLVY ISGTRKKLLY TITGFTIAHS ITLFLSATNV MVIPIEPVEA VIALSIIFLA WEIAKNKQHS LSLRYPVLVS SSFGLLHGFG FAAVLSDIGL PETEKSLALL SFNIGVELGQ LIFVLALFLL VKFASVLYKW LQHKPLTLPM LRLPISYLCG ITATFWLIER LAAF
|
| |