Gene CPS_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1413 
Symbol 
ID3521785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp1453728 
End bp1454357 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content40% 
IMG OID637283877 
Producthypothetical protein 
Protein accessionYP_268156 
Protein GI71281313 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0401797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA AGTTATATTA TATTTACGAT CCAATGTGCA GCTGGTGTTG GGGCTATCGT 
CCTGTTTGGG ACCTTTTACA ACAACACTTG CCTAAGTCGA TAGATGTGGA ATATGTTGCA 
GGTGGTTTGG CTCCTGATTC AGACAGCGCA ATGCCAATTG ATCAACAGCA GATGATTCAA 
AATCATTGGC GTACCATAGA GCAAAAATTA GGTACAAAGT TTAATTATGA TTTTTGGCGT 
GAAAATACGG CAAGGCGCTC AACGTATAAC GCCTGTAGAG CTGCGATTGC AGCACACAAA 
CAGTCTTGCC AAAAAGCTAT GATAGATGCA ATTCAGCAGG CATATTACTT ACGTGCTTTA 
AATCCATCTG ATGTGGATGT GTTAGTTAGT GTGGCGAAAG AGTTAAGCGA GCAGACATCA 
CCTACTTTAG ATGTAGCGCA ATTTATTGTT GATATTAACT CGTCAGAAAC AAACAAAGAG 
TTAGCAAAAC AAGTAACTTT GGCAAGAGAA TTAACTCAGC AGGGTTTTCC ATCCTTAGTG 
CTTGACGTTG ATGGCGTTAT CCAACAAATA CCACTGGATT ACAGTGACTA CAAGACAACC 
TTGGCTTATA TAATAAAAAA GACGAGTTAG
 
Protein sequence
MSTKLYYIYD PMCSWCWGYR PVWDLLQQHL PKSIDVEYVA GGLAPDSDSA MPIDQQQMIQ 
NHWRTIEQKL GTKFNYDFWR ENTARRSTYN ACRAAIAAHK QSCQKAMIDA IQQAYYLRAL 
NPSDVDVLVS VAKELSEQTS PTLDVAQFIV DINSSETNKE LAKQVTLARE LTQQGFPSLV 
LDVDGVIQQI PLDYSDYKTT LAYIIKKTS