| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1402 |
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| Symbol | |
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| ID | 3521767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1441206 |
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| End bp | 1442486 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283866 |
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| Product | putative C4-dicarboxylate transporter family protein, DctM subunit |
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| Protein accession | YP_268145 |
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| Protein GI | 71281296 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGTT TAATTCTATT TGCTATTGCC TTAGTTTTTT TGTTTTTCGG TTATTCGGTC
GCTTTCACCT TTGCTGGTAT TTCGGTAATC GTTGGCGTAT TAACCTTAGG AGTCGATTTA
TTTGCATTTA TGCCCTATCG CATTATGAGC ATCATGGAAA ATACCATTTT AATGGCCATT
CCAATGTTTG TATTTATGGG CATAGTTTTA CAAAAAACGG GCTTAGCTGA ACGCTTACTT
GAATCATCAG CAAAACTTTT CGGCACTATT CCTGGTGGCC TTGCTATTTC CACCATTATT
GTTGGCGCTT TATTAGCCGC ATCCACGGGT GTTGTTGGTG CTAGTGTGGT TGCTATGGGC
GTTATTTCTT TACCTGTTAT GCTAAAAAAC AACTATCACC AACCGACAGC AGCGGGTGTT
ATTTGTGCTT CAGGTACTTT AGGACAAATT ATTCCACCAT CCATCATTTT AATTATACTC
GGTGATGTTA TGGGCGTGCC GGTAGGTGAT TTATTTAAAG CGGCTGTTGT TCCTGGATTT
TTACTGATTC TTGGATACAC AGTTTATATT TTGATTTTAG GAAAATTTAA ACCAGAATAC
TGTCCTGCAA TGGTAGTGAC TGAAAACAAA AGAGACTTAT TGATACAAGC AGCAAAAGAT
ATTGTTCCGC CCCTCATTCT TATTTTATCA GTACTGGGTT CTATCTTTTC AGGTATTGCA
ACACCAACTG AATCCGCTTC AATAGGCGCT GTTGGCGCTA TGGTTTTAGC TAAGTTTTAT
GGTTCTTTTT CATTTAAAAA TATCAATGAA ATATCCCTTG AAACAGTCAA AGTTACTTCA
ATGATTTTTG CCGTGCTAAT AGGCGCAACA GCATTTTCTA TGGTGTTTAG CTATTCAGGC
AGTGAGTATT TAATTGAAGA GTTTTTCTTA GATTTACCTG GCGATAAGTG GACTTTCTTG
ATAATTGCCA TGGTTGCCAT ATTGGTACTA GGTTTCTTTA TCGATTTTAT TGAAATTGCA
TTTTTAGTGG TGCCTATTTT AACGCCAGTC GCTATTGCTT TTAATATTGA TTTAGTTTGG
TTTGCTGTGC TTATCTCAAT GAACCTACAA ACTTCATTTT TAACTCCCCC CTTTGGCTTT
AGTCTGTTTT ACCTCAAAGG TGTTGCCCCT AAAGGTTTCA AAACCACCAC AATTTATAAA
GGTGTTATTC CCTTTATTTT AATTCAAATT ACCGTGCTGT TATTGGTACT ACTGTTTCCA
GAACAGTTGA TCTTTTTTTA A
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| Protein sequence | MIGLILFAIA LVFLFFGYSV AFTFAGISVI VGVLTLGVDL FAFMPYRIMS IMENTILMAI
PMFVFMGIVL QKTGLAERLL ESSAKLFGTI PGGLAISTII VGALLAASTG VVGASVVAMG
VISLPVMLKN NYHQPTAAGV ICASGTLGQI IPPSIILIIL GDVMGVPVGD LFKAAVVPGF
LLILGYTVYI LILGKFKPEY CPAMVVTENK RDLLIQAAKD IVPPLILILS VLGSIFSGIA
TPTESASIGA VGAMVLAKFY GSFSFKNINE ISLETVKVTS MIFAVLIGAT AFSMVFSYSG
SEYLIEEFFL DLPGDKWTFL IIAMVAILVL GFFIDFIEIA FLVVPILTPV AIAFNIDLVW
FAVLISMNLQ TSFLTPPFGF SLFYLKGVAP KGFKTTTIYK GVIPFILIQI TVLLLVLLFP
EQLIFF
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