Gene CPS_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1401 
Symbol 
ID3522444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1440001 
End bp1441047 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content39% 
IMG OID637283865 
Producthypothetical protein 
Protein accessionYP_268144 
Protein GI71281972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00461856 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACA AGAAAAATAT TATATTATCT GCTTGTATAC TGGCAATGTC TGGTGCAGCA 
AATGCAGGTT ATGAATATAA AATTTCAGAT AACGATACCA TTACGTTTGG TGGTTATATA
AAAGCCGATG TTCGTTATGT AGACGGTAAT ATTGCCGCCA CAAATTACTG GTATGGTAGT
GGTACTGTAT TACCTGAAAG CAAATCTAAT TTTGGTATAG CGGTTAATGA AACCCGTTTC
AACACTAAAT ATGTTCATGG TGATGTCACT GGCTTTATTG AGATGGATTT TTATGGTGAT
GCTGTTTCTG GTGGGGGAAA TGAGATTATT TCTAATTCAT CCAATCCTAG ATTACGCCAT
GCATTTATTA AATATAAGAA TATTTTAGTT GGCCAAACTT GGACTACCTT TCAAAATACA
AGCTCTTTGG CTGAAGCCGC AGATTTTGGT GGTCCATTGG TTGCTTCTGC TTTTATCAGA
CAAGGACAAG TACGTTATAC GATCGGTGGT TTACAAATTG CTTTAGAGAA TCCTGAAAGT
TTTGGTGGTC AGAGCGGTGA TGATAAAGTG CCTGATTTTA TCGCTAAATA TACCTTTAAG
GGTGATTGGG GTAATATTTC TGTTTCCGGC TTAGCGAGGC AATTACAAAC AACTGGGGGT
GATAGTGAAT CAGCCTTTGG TTACGGCATA GCGGGACGCT TAAAAACCAT TGGCAAAGAT
GACTTTCGCT TTCAACTTCA TGCAGGTAAT GTTGGTCGTT ATGTCGGCGT AGCTGCAGCC
ACTGATTTAG TGGGTGAAGA AGTAGAAGAG TCGACCGCGA TCATGGTTGC TTATCGTCAC
TTTTGGACCG ATGATATTCG CAGCTCAGTT TTTTACGGAA ATATCACCAC TGACTTATCT
GACCGAGATA GAAGCCATTG GGGTGTGAAT ATTTTTAAGA ATTATACCAA AGAGTTGTCT
TTTGGTTTAG AGTTGGGTAA TTTTGAAATG GCAGAGCAAG ATGCTGACTC TGATTATGTT
CAGTTATCGA CTAAATATGT ATTCTAA
 
Protein sequence
MLNKKNIILS ACILAMSGAA NAGYEYKISD NDTITFGGYI KADVRYVDGN IAATNYWYGS 
GTVLPESKSN FGIAVNETRF NTKYVHGDVT GFIEMDFYGD AVSGGGNEII SNSSNPRLRH
AFIKYKNILV GQTWTTFQNT SSLAEAADFG GPLVASAFIR QGQVRYTIGG LQIALENPES
FGGQSGDDKV PDFIAKYTFK GDWGNISVSG LARQLQTTGG DSESAFGYGI AGRLKTIGKD
DFRFQLHAGN VGRYVGVAAA TDLVGEEVEE STAIMVAYRH FWTDDIRSSV FYGNITTDLS
DRDRSHWGVN IFKNYTKELS FGLELGNFEM AEQDADSDYV QLSTKYVF