Gene CPS_1396 details

Gene Information

• Locus tag: CPS_1396
• ID: 3519270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 1436742
• End bp: 1437323
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637283860
• Product: TetR family transcriptional regulator
• Protein accession: YP_268139
• Protein GI: 71279224
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAATG CTGAGTTTGA TAGAGAAAAA GTATTGAGAT CTGCAATGAA TGCTTTTATG 
AATAAAGGTT ATGCAAATAC CAGCATGCAA GACCTTAAAA AAGCGACAGG TCTTCATCCA 
GGTTCTATTT ATTGTGCCTT TGAAAATAAA CGGGGTTTAT TATTAGAAGC GCTTGAACAA 
TACCGGTTAG ATAGATCTAC TGAATTTGAG AAATTTTTTT CTGCATCACA AAAAACAACC 
GATAATTTAA AATTATATCT CGATAATGTC GTCACTGAGT GTATCAGTTG TGATAATACT 
CAAGCCTGTT TAATGACCAA AGCTTTGAAT GAAACCGCAG AGCAGGATAT TGAAATACAG 
CAGATAATTA GTAATAACTT ATCTATGTTG CAACAAGCCT TTACTGAAAA GTTTGAACAA 
GCTAAAGAAG AAAAAGGCAT CAGCGCGCAC AAAGATTGTG AGCACTTAGC GAGATATTTT 
TTGATGGGGA TATACGGTTT AAGAACTTTT GCTCAAACTC ACCCTAAGCC TGAAATATTA 
GAGCAGCTCG CAGAGCAGCT TTATCAAGAT GTATTAAGGT AA 

 

Protein sequence

MRNAEFDREK VLRSAMNAFM NKGYANTSMQ DLKKATGLHP GSIYCAFENK RGLLLEALEQ 
YRLDRSTEFE KFFSASQKTT DNLKLYLDNV VTECISCDNT QACLMTKALN ETAEQDIEIQ 
QIISNNLSML QQAFTEKFEQ AKEEKGISAH KDCEHLARYF LMGIYGLRTF AQTHPKPEIL 
EQLAEQLYQD VLR