| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1380 |
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| Symbol | phrB |
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| ID | 3520518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1420655 |
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| End bp | 1422067 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283844 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_268123 |
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| Protein GI | 71280055 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.866986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTACTTT GGCTCCGTAA TGACCTTCGA ACACACGACA ATCCAGCGTT ACACTATTTC
CTGAGTCGTA ACGCCTTAAG TCAACATGAT TCAGCAGTAC CAGCGAAAGC TATCTTTTTT
ATCTGTGAAC AACAATGGCA ACAACATGAT TGGTCGCCGA TAAAGATAGA TTTTATTAAG
CGTCACGCCC ATGCCCTTGT TAAAGAACTC GCGCTATTAA ATATCGAACT TGAATTGATT
GAACTCGATA ATTTTACCCA GCAAAAAACG TATTTACACA GCTATTGTCA ACTGCACAAT
ATTACTGAAG TGGTGGCTAA TAGTGAGGTT GAATTTAATG AACAGCAACG AGATAAAGCC
TTATATTTAG AATTAAAGGC TAGCGGTATT CCATTAACCT TACTTGAAGC AGACGTAATC
GTACCAAAAG GCAAAGTCCT GAATCAGTCG GGTATTATGT ATAAGGTTTT TACACCGTTT
AAGCGTGCTT GGTTAACCTA TATTCAGCAA GGCGGCTTTG AGTATTTAGG CAAAGTATCT
GTTAAATCGT CAGCGGTTAA CAAGGCTGAT AATCAAGAAG AAGATCAGGG AAGTATTTCT
AGTACCTGGC CGCTAGCAAC TGTTTTTGAG CAGCAAATAC TACCAAAGTT TTACCAACAA
AAAATAAGCA CTTACAAACT TAATCGTGAT ATACCATCGA TTAAAGGTAC GTCGGGTATA
TCACCTTATT TGGCTGCAGG TGTTATCAGT CCTCGTTTTG TACTTCGATT ATTACTTAAC
AAACATCCCG ATTTGTTAGT CGCGTCAGAC AGTGAAGAAT TTTCATGGTT GAATGAGATT
ATTTGGCGAG AGTTTTATCG CCACCTGCTT TTTCATGAAC AACGATTATG TAAACACCAA
TGTTATAAAG AAAATTATCA AGAGATGTTG TGGCATAACG ATGCTGCATT ATTTGATGCG
TGGTGCCAAG GCAGAACTGG CTACCCACTT GTTGATGCTG CAATGAGGCA GCTCAATCAA
ACAGGCTGGA TGCATAATCG TCTTCGTATG GTCGTGGCGA GCTTTCTAAC CAAACATTTA
CTCATTGATT GGCGATTAGG TGAAAAATAT TTTATGCAGC ACCTGATTGA CGGCGATTTA
GCTTCAAATA ATGGTGGCTG GCAATGGGCG GCTAGCACTG GCTGTGATGC ACAACCTTAC
TTTAGGATTT TTAATCCTAT TAGACAAAGC GAACGTTTTG ATCCAAAGGG CGTTTTCATA
CGTAAATATA TACCAGAGCT TAACAATATT TCTGATAAGG CGATTCACTT TCCTCATCAA
TATATTAAGG ATAATGAACT AAATATTTAT TGGCCAGCGA TTGTTGAGCA CAAAGAGGCT
AGGTTAAAAG CGTTAGCTTT TTATAAGGTG TAA
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| Protein sequence | MLLWLRNDLR THDNPALHYF LSRNALSQHD SAVPAKAIFF ICEQQWQQHD WSPIKIDFIK
RHAHALVKEL ALLNIELELI ELDNFTQQKT YLHSYCQLHN ITEVVANSEV EFNEQQRDKA
LYLELKASGI PLTLLEADVI VPKGKVLNQS GIMYKVFTPF KRAWLTYIQQ GGFEYLGKVS
VKSSAVNKAD NQEEDQGSIS STWPLATVFE QQILPKFYQQ KISTYKLNRD IPSIKGTSGI
SPYLAAGVIS PRFVLRLLLN KHPDLLVASD SEEFSWLNEI IWREFYRHLL FHEQRLCKHQ
CYKENYQEML WHNDAALFDA WCQGRTGYPL VDAAMRQLNQ TGWMHNRLRM VVASFLTKHL
LIDWRLGEKY FMQHLIDGDL ASNNGGWQWA ASTGCDAQPY FRIFNPIRQS ERFDPKGVFI
RKYIPELNNI SDKAIHFPHQ YIKDNELNIY WPAIVEHKEA RLKALAFYKV
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