| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1377 |
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| Symbol | |
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| ID | 3521827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1418223 |
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| End bp | 1418840 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283841 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_268120 |
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| Protein GI | 71281355 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.24965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGACTA ACTTGCTAAG CAGACCGACA AGTGCTAAAT CTACTAGTAT GTCAGATAAA
ATAAATCACC CACAACTCTG CCAATGGCTA GAGTCTGTTG CTATAAGTCG AGACAAACAA
GCTTTCACTC ATTTGTTTCA GTTCTTTGCA CCCAAAATTC TACGTATTGC ACGTGGTAAA
TTTCCTAATG AAGCACAAGC CAATGAAGTC GTGCAAGACA CTATGAGTAA TGTGTGGAGA
AAAGCCCACC TTTACAATCA AGACAAGGGG GCTGCAACCA CTTGGGTATA CACGGTAATG
CGTAACGTTA CTTTCGATAT GCTGAGAAAA ATTCAAGGTA ATAAAGAAGA TAATCTAAGT
GATGATATTT GGCCTATCGC TGAAAGTATG AGCATCGAAA ATGAAATTTT TGATGACCAT
TTAGAACATG CAAACTTGTT AAGTGTCATA GAAGAGTTAC CTCAAGCTCA ACAAGACGTT
GTTAAAGGTT TTTACTTTAG AGAAATGTCT CAAGAGCAGC TAGCTGTGCA TCTACATTTA
CCACTAGGGA CAGTTAAATC TCGATTACGT TTGGCCCTAG GAAAACTCAA AGTACAGTTA
GGAGAAAAAC ATGATTAA
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| Protein sequence | MQTNLLSRPT SAKSTSMSDK INHPQLCQWL ESVAISRDKQ AFTHLFQFFA PKILRIARGK
FPNEAQANEV VQDTMSNVWR KAHLYNQDKG AATTWVYTVM RNVTFDMLRK IQGNKEDNLS
DDIWPIAESM SIENEIFDDH LEHANLLSVI EELPQAQQDV VKGFYFREMS QEQLAVHLHL
PLGTVKSRLR LALGKLKVQL GEKHD
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