| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1354 |
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| Symbol | |
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| ID | 3522031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1393776 |
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| End bp | 1396001 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283818 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_268097 |
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| Protein GI | 71281559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.945441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAA AAATAATTTA CACCTATACC GATGAAGCAC CACTGCTAGC GACCTGCTCG
TTACTGCCGA TTATTAAAAC TTTTGCAGCA TCTGCAGACA TAGATATTGA ACTAAAAGAT
ATATCTCTTG CGTCTAGGGT TTTATCTGCC TTCTCCGATA TTTTACCTGC AGATCAACAA
GTACCTGATA CATTAGCCGA ACTAGGTGCC TTAACTCACC ACCCTGATAC TAATATCATC
AAACTCCCCA ATATCAGTGC TTCAATTCCT CAACTAAAAG ACGTTATCAG TGAATTACAA
GCACAAGGTT ACGCTATTCC TGATTATCCA GAATCGCCAA AAACAGATGA AGATAGATCA
AATGAAGCTA AATATTCAAA AACCTTAGGC AGTGCGGTAA ATCCAGTACT TCGTGAGGGT
AATTCTGACC GCCGCGCTCC ACCGTCGGTG AAAGCTTTTG CCAGAAAAAA TCCACATTCC
ATGGGTAAGT GGAGTCAAGC ATCAAGAACC CATGTATCGC ACATGCATTC AGGCGATTTT
TATGCCAGTG AAAAGTGTAT GACTATGGAT AAAGCCTGTG ATGTAAAAAT TGAGTTTGTC
GCTAAAGATG ATGGTGCAGT GACGGTATTA AAAGAAAAAA CCTCACTTCA GGCAGGTGAA
ATCATTGACA GTATGTTTAT GAGTAAAAAG ATCCTCTGTG AATTCTTAGA GCAAGAGATG
GAAGATGCGA GAGAAACCGG GGTGATGTTC TCCTTCCATG TCAAAGCGAC CATGATGAAA
GTATCGCATC CCATTGTGTT TGGCCACGCG GTTAAAGTTT ATTATAAAGA TTTGTTTGCT
AAGCACGCTG AAACCTTTGA AAAATTAGGT GTTAATGCCA ATGATGGTGT CAGCAGTATC
TATGAAAAAG TAAAACAATT GCCTGAATCT TGGCGTGAAG AAATATTGGC CGACTTACAT
GCTTGTTATG AAAAACGTCC TGAATTAGCA ATGGTCGACT CAGCTAAAGG TATTTCAAAC
TTACATACCC CAAATGAGGT TATTGTCGAT GCTTCAATGC CTGCGATGAT TAGAGCGGGC
GGAAAAATGT GGGGGCCTGA TGGTAAATTG AAAGATACTA AGGCGGTGAT GCCAGAGAGT
ACTTTTGCAA GAATTTACCA GGAAATCATT AACTTTTGTA AAACTCACGG GGCATTTGAT
CCTACAACCA TGGGAACCGT GCCAAACGTA GGATTAATGG CTCAAAAAGC AGAAGAATAT
GGTTCACATG ATAAGACATT CGAAGTACAG GGGGATGGTT GTATTCGCAT TGTTGATGAC
GAAGGAAAAA CGTTATTAAC CATGGATGTT GAAGAGGGTG ATATTTGGCG GATGTGCCAA
GTAAAAGATG CACCGATACA AGATTGGGTC AAATTAGCCG TTGCCCGTGC AAAGTTGTCT
GATACCCCAG CGGTATTCTG GTTAGATGAA TACCGTCCAC ATGAAGCTGA ATTGATTAAA
AAAGTTAAAC TGTACCTGAA AGATCATGAT TTGACCGGAT TAGATATTCA AATAATGTCA
CAAACTAGAG CGATGCGTTA TACGCTAGAG CGTATTTTAC GTGGTGGGGA TACCATCTCT
GTTACGGGTA ATATTCTGCG TGATTACTTA ACCGATTTAT TTCCGATCTT AGAGTTAGGT
ACAAGTGCCA AAATGTTATC CATAGTGCCA TTAATGGCGG GTGGCGGTTT ATTTGAAACA
GGGGCAGGCG GATCAGCACC TAAGCATGTT AAGCAGCTAA TAGAAGAAAA TCATTTACGA
TGGGATTCTC TTGGTGAATT CTTGGCGATA AGTGCTTCTC TTGAAGATTT AGGTATCAAA
CAAGACAGCG CTAAAGCAAA ACTACTGGCA AAAACATTAG ATCAAGCAAC TGCTGAGTTA
TTGGAAAATG GCAAATCTCC GTCTCGTAAA ACCGGAGAGC TAGATAATCG TGGCAGTCAC
TTCTACTTAG CACTTTACTG GGCAAAAGCG TTGGCAGAGC AAACTGAGGA TACTGAACTT
CAACACCACT TTGCACCATT AGCTCAATCA TTAACTGAAA ATGAAGCCGC TATCGTCAGT
GACTTAACAA CAGATCAATG GCATTCCGTT GATATTGGTG GTTATTACAA AGCAGATGCT
AAAAAGATTA TTGAAATAAT GCGACCGTCG AAATGCTTTA ATGAGGTATT AGCAGCATTT
AAATAA
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| Protein sequence | MSSKIIYTYT DEAPLLATCS LLPIIKTFAA SADIDIELKD ISLASRVLSA FSDILPADQQ
VPDTLAELGA LTHHPDTNII KLPNISASIP QLKDVISELQ AQGYAIPDYP ESPKTDEDRS
NEAKYSKTLG SAVNPVLREG NSDRRAPPSV KAFARKNPHS MGKWSQASRT HVSHMHSGDF
YASEKCMTMD KACDVKIEFV AKDDGAVTVL KEKTSLQAGE IIDSMFMSKK ILCEFLEQEM
EDARETGVMF SFHVKATMMK VSHPIVFGHA VKVYYKDLFA KHAETFEKLG VNANDGVSSI
YEKVKQLPES WREEILADLH ACYEKRPELA MVDSAKGISN LHTPNEVIVD ASMPAMIRAG
GKMWGPDGKL KDTKAVMPES TFARIYQEII NFCKTHGAFD PTTMGTVPNV GLMAQKAEEY
GSHDKTFEVQ GDGCIRIVDD EGKTLLTMDV EEGDIWRMCQ VKDAPIQDWV KLAVARAKLS
DTPAVFWLDE YRPHEAELIK KVKLYLKDHD LTGLDIQIMS QTRAMRYTLE RILRGGDTIS
VTGNILRDYL TDLFPILELG TSAKMLSIVP LMAGGGLFET GAGGSAPKHV KQLIEENHLR
WDSLGEFLAI SASLEDLGIK QDSAKAKLLA KTLDQATAEL LENGKSPSRK TGELDNRGSH
FYLALYWAKA LAEQTEDTEL QHHFAPLAQS LTENEAAIVS DLTTDQWHSV DIGGYYKADA
KKIIEIMRPS KCFNEVLAAF K
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