| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1343 |
|---|
| Symbol | |
|---|
| ID | 3522569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1380071 |
|---|
| End bp | 1381045 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637283807 |
|---|
| Product | di-haem cytochrome c peroxidase |
|---|
| Protein accession | YP_268086 |
|---|
| Protein GI | 71282097 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAC CTTTTCTTTC AACGATGCTG ACATTGTTAT GTTTTATTGG CCTTAATCAA
GGTTACACGC AGTCCTCAAC ACAGGACATT GCGCTATCTT TCTTTGAACC GCTTCCCCAT
GTTATGCAAG GAGCTGAACA AGATACCTCA GCATTAATTA ACTTAGGTAA AAAATTATAC
TTTGAAACCG CGCTATCAAT AAACCATTCT CAATCATGTA ATAGCTGCCA TAATCTCAAC
AATGATGCAG CAGGTGTCGA TCACTTGAAG GTATCTATAG GTGCCTTGGG AAGTATCGGT
GAACGTAATG CTCCCACTAC ATGGAATGCT GGTTTACATG TCGCTCAATT TTGGGATGGG
CGAGCGAAAA CGTTAGCGCA ACAAGCTAAG TTTCCTATTT TCAATGTAAA AGAAATGGCG
TTGACCTCTG AAAGTCAGGT AATAGAACGC CTTAACAGTA AAGGTTATTT AGCTGATTTT
AACAGTGGCT TTCCACAACA ATTATCGCCA ATAAACCTAG AAAACATTGC CCAAGCACTT
GCCGCATTTC AGCGAACATT AATCTCAAAA GATCGGTTTG ATGATTACTT AGCAGGCGAT
AAAGATGCGA TCAGTCAAAG TGAAAAAGCA GGCTTACGGG TATTTATAGA TAAAGGTTGT
GTTGCTTGTC ACAATGGCGC AGTCATTGGT GGTCAACTCT TTATGAAAAT GGGTATAGTG
CATCCATATC CAAATAAGAT AGATAAAGGT AAAGCGCAGG TAACGGGGAA TCCCGCTGAC
AATTATTTTT TTAAAGTACC TTCTTTGCGA AACATACTCA ACACCGCCCC CTATTTTCAT
GACGGTGCCG CGGCAACTAT AGAGCAAGCA ATTGAAGATA CCGGTTGGCA TCAACTAGGT
ATTAAACTCA ACGAACAAGA AGTTAAATCG ATTAAAATCT TTTTTAAGAC CCTTAATAAT
CAAAAAAGAA TTTAA
|
|---|
| Protein sequence | MIKPFLSTML TLLCFIGLNQ GYTQSSTQDI ALSFFEPLPH VMQGAEQDTS ALINLGKKLY
FETALSINHS QSCNSCHNLN NDAAGVDHLK VSIGALGSIG ERNAPTTWNA GLHVAQFWDG
RAKTLAQQAK FPIFNVKEMA LTSESQVIER LNSKGYLADF NSGFPQQLSP INLENIAQAL
AAFQRTLISK DRFDDYLAGD KDAISQSEKA GLRVFIDKGC VACHNGAVIG GQLFMKMGIV
HPYPNKIDKG KAQVTGNPAD NYFFKVPSLR NILNTAPYFH DGAAATIEQA IEDTGWHQLG
IKLNEQEVKS IKIFFKTLNN QKRI
|
|---|
| |